| Protein ID: 59714400 |
 T4SS name [ID] | VirB [213] |
| Gene symbol | - |
| Locus tag | VF_B0044 |
| Strain | Vibrio fischeri ES114 |
| Replicon | plasmid pES100 [GenBank: NC_006842] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 32705..34531 [+] |
| Product | protein VirD4 |
| Component type | VirD4 |
| UniProt ID | Q5DY60 |
| KEGG ID | vfi:VF_B0044 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 9.7e-110, Aligned region: 66..523 TraG-D_C [PF12696], Evalue: 7.6e-27, Aligned region: 367..483 TrwB_AAD_bind [PF10412], Evalue: 5e-21, Aligned region: 280..487 |
| Protein Sequence: 608 a.a. [Download] |
| >gi|59714400|ref|YP_207174.1| protein VirD4 [Vibrio fischeri ES114] MIHSANTEIVTPYTIIEQWIYYSEDMRYQKSLVTALLIGFGIAVIAPTLLFLFNTKEKEELHGSARFATQ DEIKKEGLTNNNGKGILIGQFNGFLGFFKTYLYFNSDSFILLIAPTRSGKGVGVVIPNLLVYNQSMVILD LKQENFSITSKYRAKYGQQVFLFNPFTENGQTHRYNPLSYVREGDCKIGDILTITASFYPIDDLKNSFWN NQASNLFLGLALMISETPSLPFTIGELLRQSSGKGKPLKEYLQGIMDDREKSSSPLSESCIDALNRFIAL TDNSLSNVLASFNAPLTLWANPLFDAATSANDFDLRELRKKKMTVYIGITPDYLEQAERILNLFFSQLIN INTKELPEHNPELKYQCLLVMDEFTAMGRIGILAKSVSYMAGYGLRLLTIIQAPSQLDSVYGKEEARTYK TNHAGQILFAPRENEDAEEYSKAIGYKTVKAKSNSKTRGELKQTDSTSDQRRAVMLPQEIKEIGMWKEII CIENLKPIFCKKVQYFNDPVFIDRLKEVSSSLKSIEGIPTRDQLKNAITNKELQIEIPTLERIDSKPTPT LFDSPLNQPLPLSDHDIATVQEEVETEEQYDESLLATTYDDSDLPDFL |
| Nucleotide Sequence: 1827 bp [Download] |
| >gi|59714356|ref|NC_006842.1|:32705-34531 Vibrio fischeri ES114 plasmid pES100, complete sequence ATGATCCATAGTGCAAATACAGAAATCGTCACGCCCTATACCATCATAGAGCAATGGATATATTACTCTG AGGACATGCGCTATCAAAAATCGCTTGTCACCGCATTACTGATTGGTTTTGGTATTGCCGTTATCGCTCC TACCCTCCTTTTCCTTTTTAATACCAAAGAAAAAGAAGAACTTCACGGCTCGGCTCGTTTTGCAACGCAA GACGAGATCAAAAAAGAAGGCTTAACAAACAATAACGGTAAAGGGATCTTAATCGGTCAATTTAATGGGT TCCTTGGTTTTTTTAAAACCTATCTTTATTTTAATAGTGACAGTTTCATACTATTAATCGCTCCCACACG AAGCGGTAAAGGGGTTGGCGTCGTTATTCCTAATTTACTGGTTTATAACCAATCAATGGTTATATTGGAC TTAAAACAAGAAAACTTTTCTATCACCTCAAAATATCGCGCTAAGTATGGCCAACAAGTCTTTTTGTTTA ATCCATTTACAGAAAATGGACAAACACACAGATACAACCCGTTGAGTTACGTTCGTGAAGGTGATTGCAA AATTGGTGATATTCTCACTATCACTGCTTCTTTTTATCCAATCGATGATCTAAAAAATAGCTTTTGGAAT AATCAAGCCAGTAACTTATTTTTAGGGTTAGCCTTAATGATCTCTGAAACCCCGTCATTACCATTCACCA TCGGTGAACTACTAAGGCAATCGTCTGGAAAAGGAAAACCATTAAAAGAATATTTACAAGGCATAATGGA TGACAGGGAGAAATCTTCATCCCCTCTTTCTGAATCTTGTATCGATGCACTAAACCGCTTCATCGCGTTA ACCGACAACAGTTTATCTAACGTACTGGCCTCATTTAATGCCCCATTAACACTGTGGGCGAATCCATTAT TTGATGCTGCGACCAGTGCCAATGATTTTGATTTACGCGAGCTAAGAAAGAAAAAGATGACGGTTTATAT TGGTATTACACCTGATTACTTAGAACAAGCTGAGCGCATATTAAATCTGTTCTTTAGCCAATTAATTAAT ATCAATACCAAAGAGCTGCCAGAGCACAACCCTGAGCTGAAATATCAATGCTTATTGGTTATGGATGAAT TTACCGCAATGGGAAGGATAGGCATTCTTGCAAAATCCGTATCTTACATGGCTGGTTATGGCCTTCGTTT ATTAACCATTATTCAAGCACCGTCTCAACTAGACAGTGTATATGGCAAAGAAGAAGCCAGAACCTATAAA ACAAACCATGCAGGACAAATCCTATTTGCACCCCGTGAAAATGAAGATGCTGAGGAGTATTCAAAAGCCA TCGGTTACAAAACCGTAAAGGCAAAAAGTAACTCTAAGACCAGGGGAGAACTGAAACAAACGGATTCGAC ATCAGATCAACGTAGAGCCGTTATGTTACCCCAAGAAATCAAAGAGATAGGGATGTGGAAAGAAATCATT TGTATTGAAAATCTTAAGCCAATTTTTTGTAAAAAAGTTCAGTATTTTAATGATCCCGTCTTTATCGATA GGTTAAAAGAAGTCTCTTCATCCCTCAAATCGATAGAAGGAATACCCACACGAGATCAGTTAAAAAACGC GATCACAAATAAAGAGCTTCAAATTGAAATACCAACACTAGAGCGGATTGACTCTAAGCCAACTCCGACA TTATTTGACTCACCATTAAATCAACCACTGCCGTTATCAGATCATGATATTGCCACTGTTCAAGAAGAAG TCGAAACAGAAGAACAATATGATGAATCTCTTTTAGCGACAACATACGATGATTCTGACCTCCCTGATTT TCTCTAA |