Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   EL079_RS07410 Genome accession   NZ_LR134283
Coordinates   1500751..1500897 (+) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain NCTC10713     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1495751..1505897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS07385 (NCTC10713_01519) dnaA 1496212..1497555 (-) 1344 WP_003032031.1 chromosomal replication initiator protein DnaA -
  EL079_RS07390 (NCTC10713_01520) spo0J 1497784..1498551 (-) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator
  EL079_RS07395 (NCTC10713_01521) htrA 1498606..1499796 (-) 1191 WP_003032033.1 S1C family serine protease Regulator
  EL079_RS07400 (NCTC10713_01522) rlmH 1499990..1500469 (+) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL079_RS07410 (NCTC10713_01524) comC 1500751..1500897 (+) 147 WP_003029519.1 bacteriocin Regulator
  EL079_RS07415 (NCTC10713_01525) comD/comD2 1500918..1502240 (+) 1323 WP_221739197.1 GHKL domain-containing protein Regulator
  EL079_RS07420 (NCTC10713_01526) comE 1502240..1502989 (+) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=999942 EL079_RS07410 WP_003029519.1 1500751..1500897(+) (comC) [Streptococcus anginosus strain NCTC10713]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=999942 EL079_RS07410 WP_003029519.1 1500751..1500897(+) (comC) [Streptococcus anginosus strain NCTC10713]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396

Multiple sequence alignment