Detailed information
Overview
| Name | lytF | Type | Regulator |
| Locus tag | EL079_RS07125 | Genome accession | NZ_LR134283 |
| Coordinates | 1456078..1458012 (+) | Length | 644 a.a. |
| NCBI ID | WP_003032068.1 | Uniprot ID | - |
| Organism | Streptococcus anginosus strain NCTC10713 | ||
| Function | cell lysis (predicted from homology) Cell lysis |
||
Genomic Context
Location: 1451078..1463012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL079_RS07095 (NCTC10713_01462) | - | 1451200..1451427 (-) | 228 | WP_003032061.1 | hypothetical protein | - |
| EL079_RS07100 (NCTC10713_01463) | - | 1451437..1452387 (-) | 951 | WP_003032049.1 | ketopantoate reductase family protein | - |
| EL079_RS07105 (NCTC10713_01464) | purK | 1452388..1453479 (-) | 1092 | WP_003032036.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| EL079_RS07110 (NCTC10713_01465) | purE | 1453466..1453954 (-) | 489 | WP_003032076.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| EL079_RS07115 (NCTC10713_01466) | - | 1454192..1454626 (-) | 435 | WP_003032062.1 | DUF523 domain-containing protein | - |
| EL079_RS07120 (NCTC10713_01467) | purD | 1454616..1455881 (-) | 1266 | WP_003032080.1 | phosphoribosylamine--glycine ligase | - |
| EL079_RS07125 (NCTC10713_01468) | lytF | 1456078..1458012 (+) | 1935 | WP_003032068.1 | GBS Bsp-like repeat-containing protein | Regulator |
| EL079_RS07130 (NCTC10713_01469) | purH | 1458071..1459618 (-) | 1548 | WP_003032070.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| EL079_RS07135 (NCTC10713_01470) | - | 1459633..1459803 (-) | 171 | WP_223349579.1 | phosphoribosylaminoimidazolecarboxamide formyltransferase | - |
| EL079_RS07140 (NCTC10713_01471) | purN | 1459858..1460412 (-) | 555 | WP_003032059.1 | phosphoribosylglycinamide formyltransferase | - |
| EL079_RS07145 (NCTC10713_01472) | purM | 1460412..1461431 (-) | 1020 | WP_003032034.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
Sequence
Protein
Download Length: 644 a.a. Molecular weight: 71147.85 Da Isoelectric Point: 7.7438
>NTDB_id=999937 EL079_RS07125 WP_003032068.1 1456078..1458012(+) (lytF) [Streptococcus anginosus strain NCTC10713]
MKKYNQLFLLSSAMLSVFSAQLTAQAAETNNTQKSSNPATLASDITVNVSGNTASINYTRLQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAVDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSESKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYVTDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTVDTQKHTGSGLFHTHVYRNLNGQIIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWTASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
MKKYNQLFLLSSAMLSVFSAQLTAQAAETNNTQKSSNPATLASDITVNVSGNTASINYTRLQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAVDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSESKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYVTDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTVDTQKHTGSGLFHTHVYRNLNGQIIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWTASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
Nucleotide
Download Length: 1935 bp
>NTDB_id=999937 EL079_RS07125 WP_003032068.1 1456078..1458012(+) (lytF) [Streptococcus anginosus strain NCTC10713]
ATGAAAAAATACAATCAATTATTTTTACTATCCAGCGCTATGTTGAGCGTTTTTTCAGCTCAACTAACAGCTCAAGCCGC
GGAAACAAATAATACTCAAAAAAGCTCAAATCCAGCAACTCTCGCTAGCGATATTACTGTCAATGTTTCAGGAAACACTG
CTTCTATTAACTATACACGTTTGCAAACGCAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTGTTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGGAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAGAGTCCAAGCCGATTCAATCCGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TTAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGTAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAGGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATTAGCCTACCGACTTGGTCTGAAGTCAACGGCCAAGATGATATTCAGTGGTACACCGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAGTTGATACGCAAAAACACACTGGCAGTGGCCTTTTCCATACACATGTTTACCGCAA
TCTCAACGGTCAAATAATTGGACTAACAGGTACAAGCTATCAGGTAGAGAAGCCTGCTGTCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGTGACTGGACTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAGTATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
ATGAAAAAATACAATCAATTATTTTTACTATCCAGCGCTATGTTGAGCGTTTTTTCAGCTCAACTAACAGCTCAAGCCGC
GGAAACAAATAATACTCAAAAAAGCTCAAATCCAGCAACTCTCGCTAGCGATATTACTGTCAATGTTTCAGGAAACACTG
CTTCTATTAACTATACACGTTTGCAAACGCAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTGTTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGGAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAGAGTCCAAGCCGATTCAATCCGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TTAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGTAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAGGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATTAGCCTACCGACTTGGTCTGAAGTCAACGGCCAAGATGATATTCAGTGGTACACCGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAGTTGATACGCAAAAACACACTGGCAGTGGCCTTTTCCATACACATGTTTACCGCAA
TCTCAACGGTCAAATAATTGGACTAACAGGTACAAGCTATCAGGTAGAGAAGCCTGCTGTCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGTGACTGGACTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAGTATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lytF | Streptococcus gordonii strain NCTC7865 |
45.977 |
81.056 |
0.373 |
| lytF | Streptococcus gordonii str. Challis substr. CH1 |
44.961 |
80.124 |
0.36 |