Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   EL079_RS06405 Genome accession   NZ_LR134283
Coordinates   1316665..1318995 (-) Length   776 a.a.
NCBI ID   WP_003032994.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC10713     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1311665..1323995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS06390 (NCTC10713_01326) sstT 1312581..1313795 (+) 1215 WP_026248199.1 serine/threonine transporter SstT -
  EL079_RS06395 (NCTC10713_01327) trxA 1314656..1314970 (-) 315 WP_003032965.1 thioredoxin -
  EL079_RS06400 (NCTC10713_01328) - 1315179..1316597 (-) 1419 WP_003032960.1 C69 family dipeptidase -
  EL079_RS06405 (NCTC10713_01329) mutS/mutS2 1316665..1318995 (-) 2331 WP_003032994.1 endonuclease MutS2 Machinery gene
  EL079_RS06410 (NCTC10713_01330) - 1319056..1319604 (-) 549 WP_003033009.1 CvpA family protein -
  EL079_RS06415 (NCTC10713_01331) - 1319601..1319906 (-) 306 WP_003026418.1 hypothetical protein -
  EL079_RS06420 (NCTC10713_01332) rnhC 1319992..1320882 (+) 891 WP_003032992.1 ribonuclease HIII -
  EL079_RS06425 (NCTC10713_01333) lepB 1320886..1321500 (+) 615 WP_003033014.1 signal peptidase I -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 87474.97 Da        Isoelectric Point: 5.9806

>NTDB_id=999931 EL079_RS06405 WP_003032994.1 1316665..1318995(-) (mutS/mutS2) [Streptococcus anginosus strain NCTC10713]
MNRKILETLEFGKIKALFEPYLLTEQGCLELQQLFPSNKQERLETAFLEMTDMQQIFVQHPHFSLAATQDIMGLTKRLGL
EGDLNIEEFLALKRVLAVTQELTDFYEDLENVELQRLNRLFENLVSFPSLQGALQAINEGGFVESFASDNLARIRRKIQE
NEVQVRDILQDILKTKGDMLADQVVASRNGRNVLPVKNTFRHRISGVVHDISSSGNTVYIEPRAVVNLNEEITNARADER
YEILRILQELSERIRPHAAEIANNAWIIGHLDFVRAKVRFMQERGAVVPKLSDRQDIRLLHVAHPLIENAVANDLYFAAD
LTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQSD
ENSLVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKVYGIETEGVQNASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSVRVVKDAQELTDTDSDVNRVIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIIDVALTESDTILKNLHAKSSLKPHEIIEAKGQLKKLAPETVDLSKNKVLKQAKKARKPKVGDDILVISY
GQRGTLVNQLKDGRWEAQVGLIKMTLEEAEFNLLKAEKEQPKKKQVNVVKRTTTSGPRARLDLRGKRYEEAMQELDAFID
QALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVVFK

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=999931 EL079_RS06405 WP_003032994.1 1316665..1318995(-) (mutS/mutS2) [Streptococcus anginosus strain NCTC10713]
ATGAATAGAAAAATTTTAGAAACGTTAGAATTTGGGAAAATCAAGGCGCTCTTTGAACCCTATCTTCTGACAGAACAAGG
GTGCTTGGAATTGCAACAGTTGTTCCCGTCCAATAAACAAGAAAGGCTGGAGACAGCATTCTTAGAAATGACGGACATGC
AGCAGATTTTTGTACAGCATCCACATTTCAGTCTGGCTGCGACCCAAGACATTATGGGCTTGACCAAGCGCTTGGGGCTG
GAAGGCGACTTAAACATTGAAGAATTTCTCGCTCTGAAGCGGGTTCTGGCTGTCACGCAAGAATTGACTGATTTTTATGA
GGATTTGGAAAATGTTGAGTTGCAAAGATTGAATCGGCTTTTTGAAAATTTGGTTTCTTTTCCGAGCTTGCAAGGAGCGT
TGCAGGCTATCAATGAGGGCGGATTTGTTGAAAGTTTTGCTAGTGATAATTTGGCTCGCATTCGCCGAAAAATTCAAGAA
AATGAAGTTCAAGTGAGAGATATTTTGCAAGATATTCTCAAAACCAAGGGCGATATGTTAGCAGATCAAGTAGTAGCCAG
TCGAAACGGTCGCAATGTTTTGCCGGTCAAAAATACATTCCGCCATCGTATCTCAGGCGTGGTGCATGATATTTCTTCTA
GTGGAAACACGGTGTATATCGAGCCGCGGGCGGTGGTCAATCTCAATGAAGAAATCACCAATGCACGGGCAGACGAGCGC
TATGAAATTTTACGGATTTTGCAAGAATTATCAGAACGCATTCGCCCGCATGCTGCTGAAATTGCCAATAATGCTTGGAT
TATCGGACATCTGGACTTTGTTCGAGCTAAGGTGCGCTTTATGCAGGAGAGAGGAGCGGTAGTACCGAAGCTGTCTGACC
GTCAGGATATTCGACTGCTCCATGTTGCTCATCCTCTGATAGAAAATGCAGTAGCTAATGACCTGTACTTTGCGGCAGAT
TTGACTGAGATTGTCATTACGGGTCCGAATACAGGCGGAAAGACCATTATGCTCAAAACCCTAGGCTTGGCTCAGCTTAT
GGCACAGTCTGGCCTGCCTATTTTGGCAGATGAAGGGAGCCGAGTGGGAATTTTTGACCAAATCTTTGCGGACATTGGAG
ACGAGCAGTCTATTGAGCAGAGCTTATCGACTTTCTCTAGCCACATGACCAATATTGTTGCCATTTTAGAGCAGTCAGAC
GAAAATTCTTTGGTGCTTTTGGACGAGCTTGGAGCTGGAACCGACCCGCAGGAGGGTGCAGCTCTTGCTATGGCAATTCT
TGAAGACTTGCGACTGCGACAGGTCAAGACAATGGCAACGACCCACTATCCAGAGCTTAAGGTCTATGGGATTGAGACTG
AGGGAGTGCAAAATGCCAGCATGGAGTTTGATACAGATAGCCTAAGACCGACTTATCGTTTTATGCAGGGAGTGCCGGGT
CGCTCCAATGCTTTTGAGATCGCAAGGCGTTTAGGCCTGTCTGTTAGAGTGGTCAAGGATGCTCAAGAATTGACTGATAC
GGACAGCGATGTTAATCGCGTTATTGAACGCTTGGAAGAGCAGACCTTGGAAAGCCGCAAGCGGTTGGATAATATCCGAG
AGGTGGAGCAAGAAAATCTCAAATTTAACCGCGCTCTTAAAAAGCTCTACAACGAGTTCAATCGGGAAAAAGAAACTGAG
CTAAATAAGGCAAGGCTGGAAGCGCAGGAAATCATTGATGTGGCGCTGACCGAGAGTGATACGATTCTCAAAAATCTACA
TGCTAAGTCCAGTCTCAAACCGCACGAAATTATTGAAGCTAAAGGTCAGCTGAAAAAATTGGCTCCTGAAACGGTGGATT
TGTCGAAAAACAAGGTGCTGAAGCAAGCCAAAAAAGCACGGAAACCAAAAGTGGGAGACGATATTCTGGTGATTAGCTAC
GGTCAGAGAGGCACGCTTGTCAATCAGCTCAAAGACGGTCGCTGGGAAGCACAAGTTGGGCTCATCAAAATGACCTTGGA
GGAAGCAGAGTTTAACCTGCTCAAAGCTGAAAAAGAACAGCCTAAGAAAAAGCAGGTCAATGTGGTGAAACGGACGACAA
CAAGCGGACCAAGAGCCAGATTGGACTTGCGAGGCAAGCGCTACGAAGAAGCCATGCAAGAGCTGGATGCCTTTATTGAC
CAAGCCTTGCTCAACAATATGGCGCAGGTAGACATTATCCACGGGATCGGGACGGGCGTCATTCGCGAAGGCGTCACCAA
ATATCTCCGTCGCAATAAGCATGTCAAGAGTTTTGGCTATGCACCGCAAAATGCTGGGGGTAGCGGAGCAACTATTGTGG
TGTTTAAGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-669)

Smr domain (Smr)

(701-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.848

100

0.405

Multiple sequence alignment