Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   EL079_RS05415 Genome accession   NZ_LR134283
Coordinates   1112522..1113154 (-) Length   210 a.a.
NCBI ID   WP_003031463.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC10713     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1107522..1118154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS05390 (NCTC10713_01125) recX 1108747..1109523 (+) 777 WP_003031458.1 recombination regulator RecX -
  EL079_RS05395 (NCTC10713_01126) - 1109610..1110143 (+) 534 WP_003031472.1 DUF402 domain-containing protein -
  EL079_RS05400 (NCTC10713_01127) - 1110263..1110580 (+) 318 WP_003031462.1 DUF960 domain-containing protein -
  EL079_RS05405 (NCTC10713_01128) - 1110706..1111080 (-) 375 WP_018543641.1 S1 RNA-binding domain-containing protein -
  EL079_RS05410 (NCTC10713_01129) - 1111082..1112482 (-) 1401 WP_003031456.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  EL079_RS05415 (NCTC10713_01130) vraR 1112522..1113154 (-) 633 WP_003031463.1 response regulator transcription factor Regulator
  EL079_RS05420 (NCTC10713_01131) - 1113156..1114151 (-) 996 WP_003031470.1 sensor histidine kinase -
  EL079_RS05425 (NCTC10713_01132) liaF 1114148..1114846 (-) 699 WP_003025810.1 cell wall-active antibiotics response protein LiaF -
  EL079_RS05430 (NCTC10713_01133) stkP 1115107..1116981 (-) 1875 WP_018543640.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  EL079_RS05435 (NCTC10713_01134) - 1116978..1117718 (-) 741 WP_003031460.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23689.21 Da        Isoelectric Point: 4.7341

>NTDB_id=999919 EL079_RS05415 WP_003031463.1 1112522..1113154(-) (vraR) [Streptococcus anginosus strain NCTC10713]
MHILLVDDHEMVRLGLKGYLDLQDDVDVVAEASNGREGVEKALELRSDVIMMDIVMPEMSGIEATLAILKEWPEAKILIL
TSYLDNEKIYPVLDAGAKGYMLKTSSADDILRAVRKVAKGELAIETEVSQKVEYHRNHIELHEDLTARERDILGLLAKGY
ENQRIADELFISLKTVKTHVSNILSKLEVSDRTQAVVYAFQHHLVPQDDI

Nucleotide


Download         Length: 633 bp        

>NTDB_id=999919 EL079_RS05415 WP_003031463.1 1112522..1113154(-) (vraR) [Streptococcus anginosus strain NCTC10713]
ATGCATATTTTATTAGTAGATGACCATGAAATGGTACGACTTGGCTTGAAAGGTTATTTGGATTTACAAGACGATGTGGA
TGTAGTGGCAGAAGCTTCAAATGGTCGCGAAGGAGTTGAAAAAGCTTTGGAGTTGCGCTCGGATGTGATTATGATGGACA
TTGTTATGCCTGAAATGAGTGGGATTGAAGCGACACTTGCTATTTTGAAAGAATGGCCTGAAGCTAAAATTCTCATTTTG
ACTTCTTATTTGGATAATGAAAAAATTTATCCGGTTTTAGACGCAGGTGCTAAAGGATATATGCTGAAAACATCTAGTGC
TGATGATATTTTACGAGCTGTCCGAAAAGTAGCTAAGGGTGAACTTGCCATTGAAACAGAGGTCAGCCAAAAAGTGGAAT
ATCATCGAAATCATATTGAATTGCACGAAGATTTGACTGCGCGTGAGCGAGATATTTTAGGACTACTGGCAAAAGGTTAT
GAAAATCAACGCATAGCAGATGAATTATTTATTTCTTTAAAGACAGTGAAAACACATGTGTCCAATATCTTATCAAAGCT
AGAAGTGAGCGATCGTACACAAGCTGTTGTTTATGCTTTCCAACATCACCTTGTCCCACAAGATGACATTTAG

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(145-199)

Response regulator receiver domain (Response_reg)

(3-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

53.883

98.095

0.529
  degU Bacillus subtilis subsp. subtilis str. 168

38.393

100

0.41

Multiple sequence alignment