Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL079_RS03610 Genome accession   NZ_LR134283
Coordinates   726476..727219 (-) Length   247 a.a.
NCBI ID   WP_003030627.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC10713     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 721476..732219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS03590 (NCTC10713_00760) - 722234..722860 (-) 627 WP_003030635.1 NUDIX hydrolase -
  EL079_RS03595 (NCTC10713_00761) - 722844..723587 (-) 744 WP_003030665.1 acyl-[acyl-carrier-protein] thioesterase -
  EL079_RS03600 (NCTC10713_00762) hemW 723591..724721 (-) 1131 WP_003030655.1 radical SAM family heme chaperone HemW -
  EL079_RS03605 (NCTC10713_00763) - 724846..726486 (-) 1641 WP_003030632.1 hypothetical protein -
  EL079_RS03610 (NCTC10713_00764) pptA 726476..727219 (-) 744 WP_003030627.1 ABC transporter ATP-binding protein Regulator
  EL079_RS09790 - 727347..727887 (-) 541 Protein_706 DUF1697 domain-containing protein -
  EL079_RS03625 (NCTC10713_00766) uvrB 727918..729906 (-) 1989 WP_003030651.1 excinuclease ABC subunit UvrB Machinery gene
  EL079_RS03630 (NCTC10713_00767) - 729997..730956 (-) 960 WP_003030658.1 CPBP family intramembrane glutamic endopeptidase -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27644.50 Da        Isoelectric Point: 4.8270

>NTDB_id=999891 EL079_RS03610 WP_003030627.1 726476..727219(-) (pptA) [Streptococcus anginosus strain NCTC10713]
MIEFNDVTKVYDDKIALNHLNLTLQSGEIVGLIGHNGAGKSTTIKSLVSVINPSHGQIFVDGKELAANRLAIKKKIGYVA
DSSDLFLRLTANEFWELVGTSYDMSPSDYEKRLTELLELFDFTAHRYEVIESFSHGMRQKVFVIGALLSDPDIWVLDEPL
TGLDPQAAFDLKQMMREHADKGNTVLFSTHVLEVAEQLCDRIAILKKGELLFYGTIEELKSQHPEKSLESIYLSLAGRRE
EVSPDAS

Nucleotide


Download         Length: 744 bp        

>NTDB_id=999891 EL079_RS03610 WP_003030627.1 726476..727219(-) (pptA) [Streptococcus anginosus strain NCTC10713]
ATGATTGAATTTAATGATGTTACAAAAGTGTACGATGACAAGATAGCGTTGAATCATCTGAATTTAACGCTTCAGAGTGG
AGAAATTGTAGGATTAATTGGCCACAATGGTGCTGGAAAATCAACAACGATTAAATCATTGGTTAGTGTAATTAATCCAT
CGCATGGTCAGATTTTTGTGGATGGTAAGGAATTAGCAGCTAATCGGTTGGCAATCAAGAAGAAAATTGGTTATGTAGCT
GATTCGTCGGATTTATTCTTACGTCTGACAGCAAATGAATTCTGGGAATTGGTTGGAACTTCTTATGATATGAGTCCTTC
AGATTATGAGAAACGTTTAACGGAGCTACTGGAATTATTTGATTTTACAGCTCATCGCTATGAAGTTATTGAATCGTTTT
CACATGGAATGCGACAAAAAGTATTTGTCATTGGTGCTCTTTTGTCTGATCCAGATATCTGGGTGTTGGATGAGCCTTTA
ACTGGTTTGGATCCGCAGGCGGCTTTTGACCTCAAACAAATGATGCGAGAGCATGCAGACAAAGGAAATACTGTTTTGTT
CTCAACCCATGTTTTAGAAGTGGCAGAGCAATTGTGTGACCGTATTGCCATTCTCAAAAAGGGAGAATTGTTGTTTTACG
GTACGATTGAGGAATTGAAAAGTCAACATCCTGAAAAATCCTTAGAAAGTATTTACCTTAGTTTGGCAGGTCGTAGAGAA
GAGGTGAGTCCTGATGCGTCTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

37.815

96.356

0.364
  pptA Streptococcus thermophilus LMD-9

37.395

96.356

0.36

Multiple sequence alignment