Detailed information NTG0999676

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AAID08_RS24815
• Genome accession: NZ_CP155917
• Coordinates: 5418770..5419843 (-)
• Length: 357 a.a.
• NCBI ID: WP_144655718.1
• Uniprot ID: -
• Organism: Achromobacter sp. EB05
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5413770..5424843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAID08_RS24795 (AAID08_24775)	phnC	5414138..5414908 (+)	771	WP_049076126.1	phosphonate ABC transporter ATP-binding protein	-
AAID08_RS24800 (AAID08_24780)	phnE	5414908..5415807 (+)	900	WP_175146857.1	phosphonate ABC transporter, permease protein PhnE	-
AAID08_RS24805 (AAID08_24785)	phnE	5415804..5416628 (+)	825	WP_054415075.1	phosphonate ABC transporter, permease protein PhnE	-
AAID08_RS24810 (AAID08_24790)	-	5416978..5418636 (+)	1659	WP_395757023.1	CHAD domain-containing protein	-
AAID08_RS24815 (AAID08_24795)	pilA	5418770..5419843 (-)	1074	WP_144655718.1	signal recognition particle-docking protein FtsY	Machinery gene
AAID08_RS24820 (AAID08_24800)	rsmD	5420202..5420768 (+)	567	WP_395757024.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AAID08_RS24825 (AAID08_24805)	coaD	5420827..5421330 (+)	504	WP_006385942.1	pantetheine-phosphate adenylyltransferase	-
AAID08_RS24830 (AAID08_24810)	-	5421507..5421758 (+)	252	WP_006391351.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AAID08_RS24835 (AAID08_24815)	-	5421755..5422975 (+)	1221	WP_395757025.1	benzoate/H(+) symporter BenE family transporter	-
AAID08_RS24840 (AAID08_24820)	-	5423049..5423435 (-)	387	WP_054500708.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 36891.60 Da
• Isoelectric Point: 8.5379

>NTDB_id=999676 AAID08_RS24815 WP_144655718.1 5418770..5419843(-) (pilA) [Achromobacter sp. EB05]
MTPNAAAPAVAPPPVAPAPVVASPPAVTPPAPVAAAPAAIAPAPAAPEPEAAPKKASWLSRLKQGLSRTGQSIGGIFVGV
KVDENLFEELESALIMADAGLEATEKLLTALRARVKKERIEDPAKVKAALRQLLADHLRPLERAFDLKRAQPLVVMIAGV
NGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARGMGVVMVD
TAGRLPTQLHLMEELKKIRRVIAKADPAAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAA
GSQGVRPIPVYWIGVGESLEDLQPFVADEFAGALLAD

Nucleotide

• Length: 1074 bp

>NTDB_id=999676 AAID08_RS24815 WP_144655718.1 5418770..5419843(-) (pilA) [Achromobacter sp. EB05]
GTGACGCCCAACGCCGCCGCGCCGGCCGTTGCCCCGCCGCCGGTTGCACCCGCGCCGGTGGTGGCATCGCCGCCCGCCGT
CACGCCTCCGGCCCCGGTCGCCGCTGCCCCCGCCGCCATCGCGCCGGCGCCCGCCGCGCCCGAACCGGAAGCCGCGCCCA
AGAAGGCGTCCTGGCTGTCGCGGCTCAAGCAGGGCTTGTCGCGCACCGGCCAGAGCATTGGCGGCATCTTCGTCGGCGTC
AAGGTCGACGAGAACCTGTTCGAGGAACTCGAATCGGCGCTCATTATGGCCGATGCCGGCCTGGAAGCCACCGAGAAGCT
GCTGACCGCGCTGCGCGCGCGGGTCAAGAAAGAGCGCATCGAGGACCCCGCCAAGGTCAAGGCCGCGCTGCGCCAGTTGC
TGGCCGATCACCTGCGTCCGCTGGAGCGCGCCTTTGACCTGAAGCGCGCGCAGCCGCTGGTGGTGATGATCGCGGGCGTC
AACGGCGCCGGCAAGACCACGTCCATCGGCAAACTGGCGCACACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGC
GGGCGACACGTTCCGCGCCGCCGCGCGCGAGCAACTGATCGAATGGGGCAGCCGCAACAACGTCACCGTGATCTCGCAGG
ATGGCGGCGACCCGGCGGCGGTGGCGTTCGACTCGGTCAACGCCGGCCGCGCGCGCGGCATGGGCGTGGTGATGGTGGAC
ACGGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAACTGAAGAAGATCCGCCGCGTCATCGCCAAGGCCGATCC
GGCCGCGCCGCACGAGGTGCTGCTGGTGGTGGACGGCAATACCGGCCAGAACGCATTGGCGCAGATCCGCGCGTTCGATG
CGGCCATCAACCTGACGGGCCTGGTCGTGACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCGGTGGCGGCG
GGCAGCCAGGGCGTGCGGCCGATCCCGGTGTACTGGATCGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCGTTCGTGGC
CGACGAATTCGCCGGCGCCTTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (153-355)

• SRP54-type protein, helical bundle domain (SRP54_N) (71-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.17	85.714	0.499