Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ABEG07_RS01795 Genome accession   NZ_CP155636
Coordinates   384556..385464 (+) Length   302 a.a.
NCBI ID   WP_002478513.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain SQ078     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 379556..390464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABEG07_RS01775 (ABEG07_01775) wecB 380573..381712 (+) 1140 WP_002478510.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) -
  ABEG07_RS01780 (ABEG07_01780) - 381898..383346 (-) 1449 WP_002478511.1 alkaline phosphatase -
  ABEG07_RS01785 (ABEG07_01785) - 383565..383660 (+) 96 Protein_354 hypothetical protein -
  ABEG07_RS01790 (ABEG07_01790) braR 383885..384550 (+) 666 WP_002460617.1 response regulator transcription factor Regulator
  ABEG07_RS01795 (ABEG07_01795) braS 384556..385464 (+) 909 WP_002478513.1 sensor histidine kinase Regulator
  ABEG07_RS01800 (ABEG07_01800) - 385570..386319 (+) 750 WP_070817104.1 ABC transporter ATP-binding protein -
  ABEG07_RS01805 (ABEG07_01805) - 386342..388303 (+) 1962 WP_225307314.1 ABC transporter permease -
  ABEG07_RS01810 (ABEG07_01810) - 388411..388794 (+) 384 WP_346842676.1 hypothetical protein -
  ABEG07_RS01815 (ABEG07_01815) - 388881..389360 (+) 480 WP_002478517.1 DUF4064 domain-containing protein -
  ABEG07_RS01820 (ABEG07_01820) - 389633..390118 (+) 486 WP_346842677.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35307.95 Da        Isoelectric Point: 7.1983

>NTDB_id=998196 ABEG07_RS01795 WP_002478513.1 384556..385464(+) (braS) [Staphylococcus lugdunensis strain SQ078]
MTMFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLKS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=998196 ABEG07_RS01795 WP_002478513.1 384556..385464(+) (braS) [Staphylococcus lugdunensis strain SQ078]
ATGACAATGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAGCAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAAAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.107

96.358

0.57

Multiple sequence alignment