Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ABDZ24_RS09605 Genome accession   NZ_CP155623
Coordinates   1755552..1756346 (+) Length   264 a.a.
NCBI ID   WP_033656399.1    Uniprot ID   A0A6I0BK65
Organism   Bacillus paramobilis strain N24509     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1750552..1761346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABDZ24_RS09590 (ABDZ24_09610) argR 1751391..1751840 (+) 450 WP_001032581.1 arginine repressor ArgR -
  ABDZ24_RS09595 (ABDZ24_09615) recN 1752108..1753847 (+) 1740 WP_000947744.1 DNA repair protein RecN Machinery gene
  ABDZ24_RS09600 (ABDZ24_09620) spoIVB 1753966..1755264 (+) 1299 WP_346817817.1 SpoIVB peptidase -
  ABDZ24_RS09605 (ABDZ24_09625) spo0A 1755552..1756346 (+) 795 WP_033656399.1 sporulation transcription factor Spo0A Regulator
  ABDZ24_RS09610 (ABDZ24_09630) - 1756638..1758164 (+) 1527 WP_346817818.1 hypothetical protein -
  ABDZ24_RS09615 (ABDZ24_09635) - 1758351..1758497 (-) 147 WP_001247671.1 YycC family protein -
  ABDZ24_RS09620 (ABDZ24_09640) - 1758548..1759276 (+) 729 WP_000172592.1 glycerophosphodiester phosphodiesterase -
  ABDZ24_RS09625 (ABDZ24_09645) - 1759325..1759558 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.13 Da        Isoelectric Point: 7.1176

>NTDB_id=998131 ABDZ24_RS09605 WP_033656399.1 1755552..1756346(+) (spo0A) [Bacillus paramobilis strain N24509]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=998131 ABDZ24_RS09605 WP_033656399.1 1755552..1756346(+) (spo0A) [Bacillus paramobilis strain N24509]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTTAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGCTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTATTTAAGGGAAGCGATCTCTATGGTGTACAATGATATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACGACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGAGGAAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCAACAAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I0BK65

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814

Multiple sequence alignment