Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABDZ24_RS02590 | Genome accession | NZ_CP155623 |
| Coordinates | 433148..435583 (-) | Length | 811 a.a. |
| NCBI ID | WP_061678382.1 | Uniprot ID | A0A1K0AZZ6 |
| Organism | Bacillus paramobilis strain N24509 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 428148..440583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ24_RS02570 (ABDZ24_02575) | ispD | 428631..429311 (-) | 681 | WP_000288280.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ABDZ24_RS02575 (ABDZ24_02580) | - | 429328..430437 (-) | 1110 | WP_000919678.1 | PIN/TRAM domain-containing protein | - |
| ABDZ24_RS02580 (ABDZ24_02585) | disA | 430598..431671 (-) | 1074 | WP_000392166.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ABDZ24_RS02585 (ABDZ24_02590) | radA | 431675..433051 (-) | 1377 | WP_001085204.1 | DNA repair protein RadA | Machinery gene |
| ABDZ24_RS02590 (ABDZ24_02595) | clpC | 433148..435583 (-) | 2436 | WP_061678382.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ABDZ24_RS02595 (ABDZ24_02600) | - | 435606..436670 (-) | 1065 | WP_000050824.1 | protein arginine kinase | - |
| ABDZ24_RS02600 (ABDZ24_02605) | - | 436675..437223 (-) | 549 | WP_000128407.1 | UvrB/UvrC motif-containing protein | - |
| ABDZ24_RS02605 (ABDZ24_02610) | ctsR | 437396..437857 (-) | 462 | WP_001244555.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90530.34 Da Isoelectric Point: 6.4054
>NTDB_id=998109 ABDZ24_RS02590 WP_061678382.1 433148..435583(-) (clpC) [Bacillus paramobilis strain N24509]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=998109 ABDZ24_RS02590 WP_061678382.1 433148..435583(-) (clpC) [Bacillus paramobilis strain N24509]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGTGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCCAAAAAGGTTATTGAGTTGTCAATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTGGGTGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCGACACTGGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAGAATCGTCTAGATCCTGTTATCGGGCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAGCCTGGTGTGG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATTCGTCAAGCTGGCAACATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGGGCAACAACTTTAGATGAA
TATCGTAAATATATTGAAAAAGATGCGGCTTTAGAGAGACGATTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAGGCACATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGTTATATTACAGATCGTTTCTTACCAGATAAGGCAATTGACTTAATTGATGAAGCTGCT
TCCAAGGTTCGCTTACGTTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTGTTAAACTTAGAATCGATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCAGTAGTGGCTGTGGCGAAAGCTGTTCGTCGTGCTAGAGCGGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACGGAGCTAGCAAGAGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTATATGGAGAAGCATTCTACTTCTCGTTT
GGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCACCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGACGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAGGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTGTCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGTGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCCAAAAAGGTTATTGAGTTGTCAATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTGGGTGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCGACACTGGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAGAATCGTCTAGATCCTGTTATCGGGCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAGCCTGGTGTGG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATTCGTCAAGCTGGCAACATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGGGCAACAACTTTAGATGAA
TATCGTAAATATATTGAAAAAGATGCGGCTTTAGAGAGACGATTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAGGCACATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGTTATATTACAGATCGTTTCTTACCAGATAAGGCAATTGACTTAATTGATGAAGCTGCT
TCCAAGGTTCGCTTACGTTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTGTTAAACTTAGAATCGATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCAGTAGTGGCTGTGGCGAAAGCTGTTCGTCGTGCTAGAGCGGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACGGAGCTAGCAAGAGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTATATGGAGAAGCATTCTACTTCTCGTTT
GGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCACCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGACGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAGGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTGTCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.705 |
79.778 |
0.42 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |