Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ELZ51_RS10140 Genome accession   NZ_LR134094
Coordinates   2004908..2005357 (-) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1999908..2010357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10120 (NCTC4669_02136) - 1999981..2000427 (-) 447 WP_003052913.1 dUTP diphosphatase -
  ELZ51_RS10125 (NCTC4669_02137) - 2000536..2001303 (-) 768 WP_126427391.1 epoxyqueuosine reductase QueH -
  ELZ51_RS10130 (NCTC4669_02138) - 2001422..2003206 (-) 1785 WP_003052917.1 ABC transporter ATP-binding protein -
  ELZ51_RS10135 (NCTC4669_02139) rcrP 2003206..2004915 (-) 1710 WP_003052919.1 ABC transporter ATP-binding protein Regulator
  ELZ51_RS10140 (NCTC4669_02140) rcrR 2004908..2005357 (-) 450 WP_003053369.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ELZ51_RS10145 (NCTC4669_02141) - 2005560..2006576 (+) 1017 WP_126427393.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  ELZ51_RS10150 (NCTC4669_02142) hasC 2006608..2007510 (+) 903 WP_003052925.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  ELZ51_RS10155 (NCTC4669_02143) - 2007674..2008348 (-) 675 WP_126427395.1 rhomboid family intramembrane serine protease -
  ELZ51_RS10160 (NCTC4669_02144) - 2008345..2008872 (-) 528 WP_126427648.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=997782 ELZ51_RS10140 WP_003053369.1 2004908..2005357(-) (rcrR) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=997782 ELZ51_RS10140 WP_003053369.1 2004908..2005357(-) (rcrR) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGTCACGAGTAATTGCGGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ATATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGGGAGAAACTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTACAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43