Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ELZ51_RS10135 Genome accession   NZ_LR134094
Coordinates   2003206..2004915 (-) Length   569 a.a.
NCBI ID   WP_003052919.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1998206..2009915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10115 (NCTC4669_02135) radA 1998537..1999898 (-) 1362 WP_126427389.1 DNA repair protein RadA Machinery gene
  ELZ51_RS10120 (NCTC4669_02136) - 1999981..2000427 (-) 447 WP_003052913.1 dUTP diphosphatase -
  ELZ51_RS10125 (NCTC4669_02137) - 2000536..2001303 (-) 768 WP_126427391.1 epoxyqueuosine reductase QueH -
  ELZ51_RS10130 (NCTC4669_02138) - 2001422..2003206 (-) 1785 WP_003052917.1 ABC transporter ATP-binding protein -
  ELZ51_RS10135 (NCTC4669_02139) rcrP 2003206..2004915 (-) 1710 WP_003052919.1 ABC transporter ATP-binding protein Regulator
  ELZ51_RS10140 (NCTC4669_02140) rcrR 2004908..2005357 (-) 450 WP_003053369.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ELZ51_RS10145 (NCTC4669_02141) - 2005560..2006576 (+) 1017 WP_126427393.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  ELZ51_RS10150 (NCTC4669_02142) hasC 2006608..2007510 (+) 903 WP_003052925.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  ELZ51_RS10155 (NCTC4669_02143) - 2007674..2008348 (-) 675 WP_126427395.1 rhomboid family intramembrane serine protease -
  ELZ51_RS10160 (NCTC4669_02144) - 2008345..2008872 (-) 528 WP_126427648.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63271.00 Da        Isoelectric Point: 6.5339

>NTDB_id=997781 ELZ51_RS10135 WP_003052919.1 2003206..2004915(-) (rcrP) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQGKIYNVGILLLIIALMGLISGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMVLVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEILNTEPAMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFKIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDHAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=997781 ELZ51_RS10135 WP_003052919.1 2003206..2004915(-) (rcrP) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTGCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGGTAAGATTTACAATGTGGGGA
TATTGTTGCTTATTATTGCGCTGATGGGATTGATTTCCGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGAGAAAAGACTTTTCGAAAAATTCAGAGTTTTTCTTATGCTAATGTGGAGGCATTTAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAACCAAATCCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTCCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTATGGTGGGTGATTGTGCTGATGGTT
ATTTTGATTGGTCTTATCATGGTTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATTAATCGAATTGCTAAGGAAAACCTTCGTGGCGTGCGTGTGGTTAAATCCTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATCGGTTATGGTTTTTCGTTGATGCAACCTGCTTTG
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACTGTTATTGG
GAATATTGCTTCTTTTATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTCGGCTTTATGGGCATGCAAGCTA
GTCGCGCCTTTGTCTCTATTGGTCGTCTCAAAGAGATTCTCAATACTGAGCCAGCCATGACCTTTGACACTGAGCAAGAA
GAAGAGGTTTCAGGTAGCATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGTCATAT
TTCCTTTAAGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTACTGGGAGGCAAACCGATTAAATCCTTGAGTCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTCTTTTCGGGAACCATTGCAGATAATCTTCGTCAAGGATCAGC
AACTGCAGATGATCATGCCATGGAACGAGCTGCACGTATTGCTCAAGCCAAGGAATTTATAGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGAGGCAATAACTTCTCCGGTGGTCAAAAACAACGGATGTCAATTGCGCGTGGCGTCATT
AACCAACCTAAGATTCTTGTTTTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAGATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTTGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(344-493)

ABC transporter transmembrane region (ABC_membrane)

(16-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.103

100

0.36

Multiple sequence alignment