Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ELZ51_RS08905 Genome accession   NZ_LR134094
Coordinates   1769992..1771026 (-) Length   344 a.a.
NCBI ID   WP_115246368.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1764992..1776026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS08870 (NCTC4669_01874) - 1765616..1765918 (-) 303 WP_003052320.1 YlxQ-related RNA-binding protein -
  ELZ51_RS08875 (NCTC4669_01875) rnpM 1765911..1766207 (-) 297 WP_003057040.1 RNase P modulator RnpM -
  ELZ51_RS08880 (NCTC4669_01876) nusA 1766223..1767380 (-) 1158 WP_003052330.1 transcription termination factor NusA -
  ELZ51_RS08885 (NCTC4669_01877) rimP 1767523..1768005 (-) 483 WP_080555695.1 ribosome maturation factor RimP -
  ELZ51_RS08895 (NCTC4669_01879) trmB 1768501..1769136 (-) 636 WP_126427115.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ELZ51_RS08900 (NCTC4669_01880) ccrZ 1769136..1769927 (-) 792 WP_003052472.1 cell cycle regulator CcrZ -
  ELZ51_RS08905 (NCTC4669_01881) pptB 1769992..1771026 (-) 1035 WP_115246368.1 ABC transporter permease Regulator
  ELZ51_RS08910 (NCTC4669_01882) pptA 1771029..1771754 (-) 726 WP_003052475.1 ABC transporter ATP-binding protein Regulator
  ELZ51_RS08915 (NCTC4669_01883) - 1771826..1772245 (+) 420 WP_115246369.1 HIT family protein -
  ELZ51_RS08920 (NCTC4669_01884) - 1772242..1772562 (+) 321 WP_126427118.1 chemotaxis protein -
  ELZ51_RS08925 (NCTC4669_01885) brpA 1772722..1773990 (-) 1269 WP_126427120.1 biofilm formation/cell division transcriptional regulator BrpA -
  ELZ51_RS08930 (NCTC4669_01886) - 1774002..1774523 (-) 522 WP_003052483.1 GNAT family N-acetyltransferase -
  ELZ51_RS08935 (NCTC4669_01887) tsaE 1774516..1774959 (-) 444 WP_115247110.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40263.56 Da        Isoelectric Point: 10.2207

>NTDB_id=997767 ELZ51_RS08905 WP_115246368.1 1769992..1771026(-) (pptB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MKALFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLLGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDYHFLLPKEEAVVAHIKQAERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRQFLKKDG
LDWEKVIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNTYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVVVMGVITLFYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=997767 ELZ51_RS08905 WP_115246368.1 1769992..1771026(-) (pptB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGCTTGGTTTTTGCTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAACC
ATTGGCCGATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATTACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAGCGCTCTGCTCTTGTGAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCCTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACAATTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGTCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTGCTGTTTATTTCTAACACTTACCTATCAGTGGCTTTAGCCCTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTATTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCTTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGTGGTCATGGGAGTCATTACACTTTTCTATCTCCCTTATAAGTTGAAGAAGATAATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(152-327)

Bacterial ABC transporter protein EcsB (EcsB)

(2-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.802

100

0.468
  pptB Streptococcus salivarius strain HSISS4

46.512

100

0.465