Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KZZ19_RS20375 Genome accession   NZ_CP155559
Coordinates   3950703..3951497 (-) Length   264 a.a.
NCBI ID   WP_140392546.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HSY204     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3945703..3956497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS20350 (KZZ19_020345) - 3946666..3946899 (+) 234 WP_237979462.1 DUF2627 domain-containing protein -
  KZZ19_RS20355 (KZZ19_020350) - 3946949..3947677 (-) 729 WP_237979464.1 glycerophosphodiester phosphodiesterase -
  KZZ19_RS20360 (KZZ19_020355) - 3947728..3947874 (+) 147 WP_001247671.1 YycC family protein -
  KZZ19_RS20365 (KZZ19_020360) - 3948063..3949589 (-) 1527 WP_237979465.1 glycosyltransferase family 39 protein -
  KZZ19_RS20370 (KZZ19_020365) - 3949886..3950449 (-) 564 WP_237979467.1 PRK06770 family protein -
  KZZ19_RS20375 (KZZ19_020370) spo0A 3950703..3951497 (-) 795 WP_140392546.1 sporulation transcription factor Spo0A Regulator
  KZZ19_RS20380 (KZZ19_020375) spoIVB 3951785..3953083 (-) 1299 WP_088097701.1 SpoIVB peptidase -
  KZZ19_RS20385 (KZZ19_020380) recN 3953202..3954941 (-) 1740 WP_088097702.1 DNA repair protein RecN Machinery gene
  KZZ19_RS20390 (KZZ19_020385) argR 3955209..3955658 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29400.06 Da        Isoelectric Point: 6.8438

>NTDB_id=997759 KZZ19_RS20375 WP_140392546.1 3950703..3951497(-) (spo0A) [Bacillus thuringiensis strain HSY204]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDTQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=997759 KZZ19_RS20375 WP_140392546.1 3950703..3951497(-) (spo0A) [Bacillus thuringiensis strain HSY204]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAACTGATACGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCGGTACTAGAGAAAATGCGACATATTGAAAGACTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAATGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTATTTAAGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
TGGATCGATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAATTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.15

100

0.811

Multiple sequence alignment