Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   KZZ19_RS06020 Genome accession   NZ_CP155559
Coordinates   1174457..1176283 (+) Length   608 a.a.
NCBI ID   WP_000003387.1    Uniprot ID   A0A2B5KPS9
Organism   Bacillus thuringiensis strain HSY204     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1169457..1181283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS06000 (KZZ19_006000) - 1169764..1170438 (-) 675 WP_088095547.1 TerC family protein -
  KZZ19_RS06005 (KZZ19_006005) mecA 1170781..1171464 (+) 684 WP_237979839.1 adaptor protein MecA Regulator
  KZZ19_RS06010 (KZZ19_006010) - 1171537..1173081 (+) 1545 WP_000799207.1 cardiolipin synthase -
  KZZ19_RS06015 (KZZ19_006015) - 1173162..1174406 (+) 1245 WP_237979840.1 competence protein CoiA family protein -
  KZZ19_RS06020 (KZZ19_006020) pepF 1174457..1176283 (+) 1827 WP_000003387.1 oligoendopeptidase F Regulator
  KZZ19_RS06025 (KZZ19_006025) - 1176412..1176585 (-) 174 WP_088095550.1 hypothetical protein -
  KZZ19_RS06030 (KZZ19_006030) - 1176816..1177709 (-) 894 WP_088095551.1 ClpXP adapter SpxH family protein -
  KZZ19_RS06035 (KZZ19_006035) - 1177709..1178107 (-) 399 WP_000043382.1 hypothetical protein -
  KZZ19_RS06040 (KZZ19_006040) - 1178288..1178866 (-) 579 WP_237979841.1 CYTH domain-containing protein -
  KZZ19_RS06045 (KZZ19_006045) - 1179011..1179382 (+) 372 WP_016088885.1 hypothetical protein -
  KZZ19_RS06050 (KZZ19_006050) - 1179413..1180051 (+) 639 WP_064476808.1 GTP pyrophosphokinase family protein -
  KZZ19_RS06055 (KZZ19_006055) - 1180070..1180867 (+) 798 WP_000673186.1 NAD kinase -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70297.60 Da        Isoelectric Point: 4.6462

>NTDB_id=997742 KZZ19_RS06020 WP_000003387.1 1174457..1176283(+) (pepF) [Bacillus thuringiensis strain HSY204]
MSEQNTAKTLPDRKEIEESSTWRLEDIFQTDAEWEKEFQAIKELLPKLTEFKGKLGDSANNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSISEDTLQTFLKENRDLSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSASSNTFGMLNNADLKFPSIKGEDGEEVEITHGRYIQFLESDDRRVREDAFKAVYETYGKYKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLVESVNDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQDMLLKSLNVLGDEYVDILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLYTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHIIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDALVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEK

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=997742 KZZ19_RS06020 WP_000003387.1 1174457..1176283(+) (pepF) [Bacillus thuringiensis strain HSY204]
ATGTCTGAACAAAATACAGCAAAAACATTACCAGATCGCAAAGAGATTGAAGAATCAAGTACGTGGCGATTAGAAGATAT
TTTCCAAACAGATGCAGAATGGGAAAAAGAATTCCAAGCCATTAAAGAGCTATTACCGAAGTTAACTGAATTTAAAGGGA
AACTTGGTGATTCTGCGAACAATTTACTTGAAGCATTGCAATATGAAGATGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCACATATGCGTTACGATCAAGATACAACAAACTCTGTGTATCAAGCGTTAAATGACCGCGCGACAAATTTATA
TTCACAAGTATCTAGTAGCACAGCATATATTGTGCCTGAAATCTTATCGATTTCAGAAGATACACTGCAAACATTCTTGA
AAGAAAATAGAGACTTAAGTGTATATGAACATGCATTAGAAGAAATTACGCGTCAACGCCCACACGTATTATCTGAAGCG
GAAGAGGCTCTATTAGCAGAAGCATCTGAAGTAATGAGTGCATCAAGTAATACATTTGGTATGTTGAATAATGCGGATTT
GAAATTCCCATCTATTAAAGGTGAGGATGGAGAAGAAGTAGAAATTACACATGGTCGTTACATTCAGTTTTTAGAAAGTG
ATGATCGTCGTGTGCGCGAAGATGCGTTCAAAGCTGTATATGAAACGTACGGAAAATATAAGAACACATTTGCAAGTACG
TTAAGCGGAGCTGTGAAACGTAATAATTTCAATGCACGTGTTCGTAAATACGATTCTGCACGTCAAGCGGCATTAAGTAA
TAATAATATTCCTGAAGCCGTGTATGATCAACTTGTTGAATCTGTAAATGATAATTTACACTTGCTACATCGTTACATTG
ATATTCGTAAGCGTGCATTAGGACTTGATGAGCTTCATATGTATGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AATGTGAAGTATGAAGAAGCACAAGATATGTTATTAAAATCTTTAAACGTACTTGGTGATGAGTATGTTGACATTTTAAA
AGAAGCATATGAAAATCGCTGGGTAGATGTGTATGAGAACAAAGGGAAGCGAAGCGGAGCATATTCATCTGGTGCATATG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAATTTATATACACTTGCTCATGAGTTCGGTCATTCC
GTGCATAGTTACTACACAAGAAAAACGCAACCGCACGTATACGGTGATTATTCAATCTTCGTTGCAGAAGTAGCATCAAC
TTGTAATGAAGCGCTTCTAAACGATTATTTATTAAAAACGACAGAAGATAAGAAAGAGCGTCTATACTTATTAAATCATT
ATTTAGAAGGATTCCGTGGTACTGTATTCCGTCAAACGATGTTCGCAGAGTTTGAGCATATTATTCATAAGAAAGTACAA
GAGGGACACGCGGTTACGCCAGACATGTTAACGGAGATCTACTATGATTTAAATAAGAAATATTTCGGTGATGCTTTAGT
AATCGATGAAGAAATTGGTTTAGAATGGTCTCGTATTCCGCACTTCTATTACAACTATTACGTATACCAATACGCAACAG
GATTTAGTGCAGCAACGGCTCTATCTAAACAAATTTTAGAAGAGGGGCAACCAGCAGTAGAACGTTACATTAATGAGTTC
TTAAAAGCAGGAAGCTCAGATTATCCAATTGAAGTGCTGAAAAAAGCTGGAGTAGATATGGCATCTCCAGAACCTGTAAA
AGAAGCATTGCAAGTATTTGAAGAGAAATTAAATGAATTAGAAGCATTATTATTTGAAGAGAAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B5KPS9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.084

97.533

0.488

Multiple sequence alignment