Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   KZZ19_RS06005 Genome accession   NZ_CP155559
Coordinates   1170781..1171464 (+) Length   227 a.a.
NCBI ID   WP_237979839.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HSY204     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1165781..1176464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS05985 (KZZ19_005985) - 1166847..1168493 (+) 1647 WP_000728618.1 peptide ABC transporter substrate-binding protein -
  KZZ19_RS05990 (KZZ19_005990) - 1168523..1168726 (-) 204 WP_000559978.1 hypothetical protein -
  KZZ19_RS05995 (KZZ19_005995) spx 1169319..1169714 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  KZZ19_RS06000 (KZZ19_006000) - 1169764..1170438 (-) 675 WP_088095547.1 TerC family protein -
  KZZ19_RS06005 (KZZ19_006005) mecA 1170781..1171464 (+) 684 WP_237979839.1 adaptor protein MecA Regulator
  KZZ19_RS06010 (KZZ19_006010) - 1171537..1173081 (+) 1545 WP_000799207.1 cardiolipin synthase -
  KZZ19_RS06015 (KZZ19_006015) - 1173162..1174406 (+) 1245 WP_237979840.1 competence protein CoiA family protein -
  KZZ19_RS06020 (KZZ19_006020) pepF 1174457..1176283 (+) 1827 WP_000003387.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26906.98 Da        Isoelectric Point: 4.0154

>NTDB_id=997741 KZZ19_RS06005 WP_237979839.1 1170781..1171464(+) (mecA) [Bacillus thuringiensis strain HSY204]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEGGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=997741 KZZ19_RS06005 WP_237979839.1 1170781..1171464(+) (mecA) [Bacillus thuringiensis strain HSY204]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGGTTTAATCG
TGAAGAAATTTGGTATGACCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATTGATGGACCGCTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACAAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGAACAAACTTTAACGAAGGTGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTATAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAGTACGGAGAAGAGTCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568


Multiple sequence alignment