Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   KZZ19_RS05690 Genome accession   NZ_CP155559
Coordinates   1107888..1111613 (+) Length   1241 a.a.
NCBI ID   WP_237979809.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HSY204     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1102888..1116613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS05675 (KZZ19_005675) - 1103046..1103639 (+) 594 WP_043936619.1 TVP38/TMEM64 family protein -
  KZZ19_RS05680 (KZZ19_005680) lepB 1103696..1104259 (+) 564 WP_088095496.1 signal peptidase I -
  KZZ19_RS05685 (KZZ19_005685) addB 1104376..1107891 (+) 3516 WP_237979807.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  KZZ19_RS05690 (KZZ19_005690) addA 1107888..1111613 (+) 3726 WP_237979809.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  KZZ19_RS05695 (KZZ19_005695) - 1111626..1111913 (+) 288 WP_237979811.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  KZZ19_RS05700 (KZZ19_005700) gerPF 1111995..1112210 (-) 216 WP_001141570.1 spore germination protein GerPF -
  KZZ19_RS05705 (KZZ19_005705) - 1112253..1112639 (-) 387 WP_237979813.1 spore germination protein GerPE -
  KZZ19_RS05710 (KZZ19_005710) gerPD 1112655..1112849 (-) 195 WP_001052807.1 spore germination protein GerPD -
  KZZ19_RS05715 (KZZ19_005715) gerPC 1112856..1113470 (-) 615 WP_088095505.1 spore germination protein GerPC -
  KZZ19_RS05720 (KZZ19_005720) gerPB 1113538..1113744 (-) 207 WP_001012506.1 spore germination protein GerPB -
  KZZ19_RS05725 (KZZ19_005725) gerPA 1113759..1113980 (-) 222 WP_001111187.1 spore germination protein GerPA -
  KZZ19_RS05730 (KZZ19_005730) - 1114075..1114254 (-) 180 WP_088095506.1 aspartyl-phosphate phosphatase Spo0E family protein -
  KZZ19_RS05735 (KZZ19_005735) - 1114501..1115400 (+) 900 WP_170930122.1 fumarylacetoacetate hydrolase family protein -
  KZZ19_RS05740 (KZZ19_005740) - 1115435..1115719 (-) 285 WP_098343164.1 hypothetical protein -

Sequence


Protein


Download         Length: 1241 a.a.        Molecular weight: 142760.08 Da        Isoelectric Point: 4.8994

>NTDB_id=997736 KZZ19_RS05690 WP_237979809.1 1107888..1111613(+) (addA) [Bacillus thuringiensis strain HSY204]
MIENWPKKPEGSQWTDDQWKAVVANGRDILVAAAAGSGKTAVLVERIIKKIINEEDPVDVDRLLVVTFTNAAAQEMKNRV
GEALEKVLIDEPGSQHIRKQLSLLNKASISTIHSFCLQVIRGYYYMLDVDPRFRIANQTENELLKEEVLDDILEAEYGIE
DNTIFFELVDRYTSDRSDDDLQRMILALHTESRAHPNPEKWLDKLVKAYDVEGKTIEDLVYASYLLEDVKFQLETAEAHI
RKATELAMLPDGPAPRVETLQADATLLRTLSSAACESWTSVYEAMQNVSWQTLKRIKKSDYNEDVVKQVDSLRNKAKDEV
KKLQEELFSRKPESFLRDFQDMHPVLEKLVQLVKVFTERFQAMKRDKGMVDFTDLEHFCLQILSEQSESGEMKPSAVALQ
YRNKFAEVLVDEYQDTNFVQESIIKFVTKDSESEGNLFMVGDVKQSIYRFRLAEPGLFLGKYKRFTQEGLAGGMKIDLAK
NFRSRHEVLAGTNFIFKQIMGEEVGEIDYDADAELKLGASYPIGEDVAAELLCIQQTEEEVQDGEEGTEVEKAQLEARLM
AQRIKAMVDSGYEVYDRKNDSMRPVQYRDFVILLRSMPWAPQIMEELKLQGIPVYADLATGYFEATEVNIMMNVFRVIDN
PMQDIPLAAVLRSPIVGLNDEELATLRAHGKKGSFYEVMSSFLKGAPLEEEQELHDKLEWFYNLLQGWREFARQQSLSDL
IWKVYGETGYYDFVGGLPAGKQRQANLRVLYDRARQYEATSFRGLFRFLRFIERILERGDDMGTARALGEQEDVVRTMTI
HKSKGLEFPVVFVAGLGRRFNTQDLMKRFLLHKDFGFGSQFIDPRKRIKYTTLSQLAIKRKMKMELIAEEMRVLYVALTR
AKEKLILIGTVKDANKEMEKWLDAREHSDWLLPDHIRAGASCYLDWIAPSLYRHRDSEMLLELGQGSIPGEIYDYDMSWK
VEVVDGKTLLAPEPVQEEKQELLEALREKKAVPLQSERKDEVYDRLMWKYGYEEATSHRAKQSVTEIKRNYQSEEGSDNA
FIKKLRAPIRTRPRFMEKKGLTYAERGTAVHAVMQHVDLKKPITEEVIREQIAGMVNKELLTFEQAEEIAIEKVISFFDS
DLGKRVLAAKSVEREVPFTMMLAAEEAYQDWQGKSDETILVQGVIDCMIEEEDGITLIDFKTDTIEGKFPGGFDQAKTIL
EDRYKVQLSLYAKALEKSLQHPVKEKCLYFFDGNHVVKVEE

Nucleotide


Download         Length: 3726 bp        

>NTDB_id=997736 KZZ19_RS05690 WP_237979809.1 1107888..1111613(+) (addA) [Bacillus thuringiensis strain HSY204]
ATGATTGAAAATTGGCCTAAAAAACCAGAAGGTAGTCAGTGGACAGATGACCAGTGGAAAGCCGTTGTAGCGAACGGACG
TGATATTTTAGTTGCAGCAGCAGCTGGATCAGGGAAAACAGCAGTATTAGTTGAACGTATTATTAAAAAGATTATAAATG
AAGAAGATCCAGTCGATGTCGACCGCCTGCTCGTTGTAACATTTACAAATGCAGCGGCGCAAGAGATGAAAAACAGAGTT
GGGGAAGCGTTAGAAAAAGTATTGATTGATGAGCCAGGATCGCAGCACATCAGAAAGCAGCTGAGCCTATTAAATAAAGC
TTCTATTTCGACAATCCATTCATTTTGTTTACAAGTCATTAGAGGATACTACTACATGCTTGATGTTGATCCTCGTTTCC
GCATTGCGAATCAAACGGAAAATGAATTGTTAAAAGAAGAAGTATTAGATGACATATTAGAAGCAGAGTATGGAATTGAA
GATAATACGATATTCTTTGAACTCGTTGATCGTTATACGAGTGATCGTAGTGATGATGACTTACAGCGTATGATTTTAGC
GCTTCATACAGAATCAAGAGCGCATCCAAATCCGGAAAAATGGCTCGATAAATTAGTAAAAGCATACGACGTAGAAGGAA
AGACAATTGAAGATTTAGTGTATGCTTCTTATCTATTAGAAGATGTGAAATTTCAGCTTGAAACAGCAGAGGCGCATATT
CGTAAAGCGACTGAACTCGCAATGCTTCCTGACGGTCCGGCGCCCCGTGTTGAAACCTTGCAAGCAGATGCAACTTTACT
TAGAACGTTATCGTCAGCTGCTTGTGAGTCATGGACAAGTGTGTATGAAGCGATGCAAAATGTATCGTGGCAAACGTTAA
AGCGCATTAAGAAAAGTGATTACAACGAGGATGTTGTAAAACAAGTAGACTCTCTTCGTAATAAAGCGAAAGATGAAGTG
AAAAAATTACAAGAAGAGTTATTTAGCCGCAAACCTGAAAGTTTCTTACGAGATTTTCAAGATATGCACCCTGTATTGGA
AAAGCTTGTTCAACTTGTAAAAGTATTTACAGAGCGTTTCCAAGCGATGAAGCGGGATAAAGGAATGGTCGATTTCACAG
ATTTAGAGCATTTCTGTTTACAAATTTTAAGTGAACAAAGTGAAAGTGGTGAAATGAAGCCATCAGCAGTAGCGCTTCAA
TATCGTAATAAATTTGCTGAAGTATTAGTCGATGAATATCAGGATACGAACTTTGTGCAGGAATCCATTATTAAATTCGT
AACGAAAGATTCTGAGAGTGAAGGGAACTTGTTCATGGTTGGCGACGTAAAACAGTCGATTTATCGTTTCCGACTAGCAG
AACCAGGCTTATTCCTAGGAAAGTATAAACGCTTTACGCAAGAAGGATTAGCCGGCGGAATGAAGATTGACTTAGCGAAA
AATTTCCGTAGTCGTCATGAAGTGTTAGCAGGAACGAACTTCATCTTCAAACAAATTATGGGTGAAGAAGTTGGGGAAAT
CGATTACGATGCTGACGCTGAATTAAAGCTAGGTGCTAGCTATCCAATAGGTGAAGATGTAGCAGCTGAACTATTATGCA
TTCAGCAAACTGAAGAAGAAGTGCAAGACGGAGAAGAAGGTACCGAAGTAGAAAAAGCGCAGCTTGAAGCTCGTCTTATG
GCGCAGCGCATCAAAGCGATGGTCGATTCAGGTTATGAAGTGTATGACCGTAAAAATGATAGTATGCGCCCTGTACAATA
CCGCGACTTCGTTATTTTACTTCGTTCGATGCCGTGGGCGCCGCAAATTATGGAAGAGTTAAAGCTGCAAGGAATTCCAG
TATACGCTGATCTTGCGACTGGTTACTTTGAAGCAACAGAAGTAAATATTATGATGAATGTATTTCGCGTGATTGATAAT
CCAATGCAAGATATTCCGCTTGCCGCCGTACTTCGTTCGCCAATCGTTGGACTAAATGATGAAGAACTTGCGACGCTTCG
TGCTCACGGAAAGAAAGGTTCGTTTTATGAAGTAATGAGCTCATTCTTAAAAGGGGCACCGCTTGAAGAAGAACAAGAAT
TACATGATAAATTAGAGTGGTTCTATAACTTACTGCAAGGATGGCGTGAATTTGCGCGCCAACAGTCTCTTTCTGATTTG
ATTTGGAAAGTGTACGGTGAGACAGGTTATTACGACTTTGTCGGCGGTTTACCAGCTGGAAAGCAAAGGCAGGCAAACTT
ACGCGTACTATATGACCGCGCAAGGCAATATGAAGCAACATCGTTTAGAGGGTTATTCCGCTTCTTACGCTTTATTGAGC
GTATTTTAGAACGCGGTGATGATATGGGTACGGCGAGAGCTTTAGGTGAACAAGAAGATGTCGTTCGTACTATGACGATT
CATAAAAGTAAAGGACTTGAGTTCCCAGTCGTGTTTGTTGCGGGACTAGGTCGCCGTTTTAATACACAAGACTTAATGAA
ACGTTTCTTACTGCATAAAGACTTCGGTTTCGGTTCACAGTTTATCGACCCGCGTAAACGAATTAAATATACGACATTAT
CGCAACTAGCAATTAAGCGTAAAATGAAAATGGAATTAATCGCGGAAGAAATGCGCGTATTATACGTAGCGTTAACGCGT
GCAAAAGAAAAGCTAATTTTAATCGGAACAGTTAAGGATGCAAATAAAGAAATGGAAAAATGGCTCGATGCAAGGGAGCA
TAGTGACTGGTTATTACCTGATCACATTCGTGCCGGAGCGTCTTGTTATTTAGATTGGATTGCACCTTCATTATATAGAC
ATCGTGATAGTGAAATGCTTCTTGAATTAGGACAAGGAAGCATTCCAGGTGAAATTTATGACTATGATATGAGCTGGAAA
GTAGAAGTTGTTGACGGCAAAACGTTACTCGCACCAGAACCGGTTCAAGAAGAGAAACAAGAATTACTAGAAGCACTTCG
TGAGAAAAAAGCGGTTCCGCTACAAAGTGAACGAAAAGATGAAGTATACGACAGATTAATGTGGAAGTACGGATATGAGG
AAGCAACATCTCACCGTGCGAAACAGTCTGTTACAGAAATAAAGAGAAATTATCAATCTGAAGAAGGCAGCGATAATGCC
TTTATTAAAAAACTACGTGCGCCAATTAGAACACGTCCTCGTTTCATGGAGAAAAAAGGATTAACGTACGCTGAAAGAGG
TACGGCAGTTCACGCTGTTATGCAGCATGTTGATTTGAAGAAGCCGATTACAGAAGAAGTGATTCGAGAGCAAATTGCCG
GAATGGTAAATAAGGAATTATTAACATTCGAACAAGCTGAAGAAATAGCAATTGAAAAAGTGATTTCATTCTTTGACAGT
GACCTAGGTAAGAGGGTATTAGCGGCGAAAAGTGTTGAGCGTGAAGTACCATTTACGATGATGCTTGCAGCAGAAGAGGC
GTATCAAGATTGGCAAGGTAAGAGTGACGAAACGATACTTGTCCAAGGGGTTATCGACTGCATGATTGAAGAGGAAGATG
GTATCACTTTAATCGATTTTAAAACGGATACGATTGAAGGGAAGTTCCCAGGTGGATTTGATCAAGCGAAAACGATTTTA
GAAGATCGATATAAAGTGCAGCTTTCGTTATATGCAAAGGCACTTGAGAAAAGCTTGCAACATCCTGTGAAAGAGAAATG
CTTATACTTCTTTGATGGCAATCATGTTGTAAAAGTTGAGGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

53.263

100

0.533


Multiple sequence alignment