Detailed information    

insolico Bioinformatically predicted

Overview

Name   addB   Type   Machinery gene
Locus tag   KZZ19_RS05685 Genome accession   NZ_CP155559
Coordinates   1104376..1107891 (+) Length   1171 a.a.
NCBI ID   WP_237979807.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HSY204     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1099376..1112891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS05650 (KZZ19_005650) - 1099958..1100749 (-) 792 WP_237979804.1 phosphotransferase -
  KZZ19_RS05655 (KZZ19_005655) cspA 1101126..1101329 (+) 204 WP_000301522.1 RNA chaperone/antiterminator CspA -
  KZZ19_RS05660 (KZZ19_005660) - 1101431..1101706 (+) 276 WP_088095542.1 hypothetical protein -
  KZZ19_RS05665 (KZZ19_005665) - 1101733..1101918 (-) 186 WP_088095493.1 hypothetical protein -
  KZZ19_RS05670 (KZZ19_005670) - 1102202..1102783 (+) 582 WP_237979805.1 competence protein ComK -
  KZZ19_RS05675 (KZZ19_005675) - 1103046..1103639 (+) 594 WP_043936619.1 TVP38/TMEM64 family protein -
  KZZ19_RS05680 (KZZ19_005680) lepB 1103696..1104259 (+) 564 WP_088095496.1 signal peptidase I -
  KZZ19_RS05685 (KZZ19_005685) addB 1104376..1107891 (+) 3516 WP_237979807.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  KZZ19_RS05690 (KZZ19_005690) addA 1107888..1111613 (+) 3726 WP_237979809.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  KZZ19_RS05695 (KZZ19_005695) - 1111626..1111913 (+) 288 WP_237979811.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  KZZ19_RS05700 (KZZ19_005700) gerPF 1111995..1112210 (-) 216 WP_001141570.1 spore germination protein GerPF -
  KZZ19_RS05705 (KZZ19_005705) - 1112253..1112639 (-) 387 WP_237979813.1 spore germination protein GerPE -
  KZZ19_RS05710 (KZZ19_005710) gerPD 1112655..1112849 (-) 195 WP_001052807.1 spore germination protein GerPD -

Sequence

Protein


Download         Length: 1171 a.a.        Molecular weight: 134414.45 Da        Isoelectric Point: 5.2129

>NTDB_id=997735 KZZ19_RS05685 WP_237979807.1 1104376..1107891(+) (addB) [Bacillus thuringiensis strain HSY204]
MSLRFVIGRAGSGKSTLCLHEVQEELKQRPRGETILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSFSRLAWKVLQEVG
GASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFFEHLGSMIAEFKRYNVTPSNVYEMWQQLDAHSSSAEQKLLA
NKVYDLQLLYDDFERALIGKYLDSEDYLQLLVEKLPQSEYVNRAEIYIDGFHSFSPQELEIVRQLMICGARVTITLTIDE
KTLAQPVNELDLFYETTLTYEKIKQIAREEKIEIEKTIPLMEQPRFHSQALAHLETHYEARPNEKFHGEASVTISTAANL
RAEVEGVAREIRRLVADEDYRYRDIAVLLRNGESYYDVMRTLFTDYNIPHFIDEKRPMSHHPLVECIRSTLEIISGNWRY
DAVFRCVKTELLYPLDVRKETMREEMDEFENYCLAYGVQGKRWTSEDPWMYRRYRSLDDTDGMITDSEREMEEKINRLRD
VVRTPVIRMQKRLKRAGTVRQMCEAVYLFLEELDVPKKLEALRIRAEESGDFLFATDHEQVWEEVMSLLDTFVEMLGEEK
MSLSMFTDVMSTGLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNEGVIPAAPMDEGMLSDEERDVLSVAGIEL
APTTRQTLLEEQFVMYQMVTRATEKLYISCPLADEEGKTLLASSFIKKIKRMFPDVKDTFITNDVNDLSRSEQISYVATP
EVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTVVSRDLYGDTIKGSVSRME
LFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKRIADRLLRENRTWADLSIKECEHLSAVVIEEIAPLLQRQIL
LSSNRHFYLKQKLQQIIFRTSIILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFSLPNGVKMEVVGRIDRVDKAEDESG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAHTWMKKGHAASPAGVLYFHIHNPIVEVKGDASEAEIEKEIL
KKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGSFSARSSIASEQEFNVLQKYVHHTFENIGKDITEGVIDIAP
YKKGNKAACTFCNFKSVCQFDESLEDNQFRTLKEMKDSEAMEKIREEVGGE

Nucleotide


Download         Length: 3516 bp        

>NTDB_id=997735 KZZ19_RS05685 WP_237979807.1 1104376..1107891(+) (addB) [Bacillus thuringiensis strain HSY204]
ATGTCACTTCGATTTGTGATTGGTAGAGCGGGAAGTGGAAAAAGTACACTTTGTTTACACGAAGTGCAAGAAGAGTTAAA
ACAACGCCCGAGAGGGGAAACAATATTATATCTTGTGCCAGAACAGATGACATTCCAAACGCAGCAGGCGTTAATTGGTA
GTGAGGATGTTAGAGGTTCTATTCGGGCACAAGTTTTTAGTTTTTCACGATTAGCATGGAAGGTACTGCAAGAAGTTGGC
GGAGCGAGTCGTCTTCACATTGATGAAGCGGGCGTACATATGTTACTTCGTAAAATTGTAGAGTCTCGCAAAGACGGATT
ATCGGTGTTCCAAAAAGCAGCGGAGCAAAATGGTTTCTTTGAACATCTTGGTAGTATGATTGCAGAGTTTAAACGTTACA
ACGTGACGCCATCTAACGTATATGAAATGTGGCAACAATTAGATGCGCATAGTAGCAGTGCCGAACAAAAGCTATTAGCG
AATAAAGTGTATGATTTACAACTATTATATGATGATTTCGAACGTGCTTTAATCGGAAAATATTTAGATTCAGAAGACTA
CCTACAATTGCTAGTGGAAAAGCTTCCACAGTCTGAATATGTAAATCGGGCTGAAATTTATATAGATGGATTTCATTCAT
TCTCCCCACAAGAGCTAGAAATTGTAAGACAGCTTATGATTTGTGGAGCGAGAGTTACGATCACGTTAACGATAGATGAA
AAAACGTTAGCACAGCCAGTAAATGAGCTAGATTTATTTTATGAAACGACGTTAACGTATGAAAAAATAAAACAAATAGC
ACGTGAAGAGAAAATAGAAATTGAAAAAACAATTCCACTTATGGAACAACCGCGTTTTCATTCGCAAGCATTAGCACATT
TAGAAACGCATTACGAAGCACGTCCAAATGAAAAGTTTCACGGAGAAGCAAGTGTCACAATTAGTACAGCAGCTAATTTA
CGAGCTGAAGTAGAAGGTGTCGCTCGTGAAATTCGTAGACTTGTGGCAGATGAAGACTATCGTTACCGAGATATTGCAGT
TCTTCTTCGTAACGGAGAAAGTTATTACGATGTGATGCGAACGCTATTTACAGATTATAATATCCCACACTTCATCGATG
AAAAACGCCCGATGTCACACCATCCGCTAGTAGAATGTATTCGTTCTACACTCGAGATTATTAGCGGGAATTGGCGTTAT
GATGCAGTGTTCCGCTGCGTGAAAACAGAGCTTTTATATCCGCTAGACGTAAGAAAAGAAACGATGCGCGAAGAGATGGA
TGAGTTTGAAAACTACTGTTTAGCGTACGGTGTACAAGGGAAGAGATGGACTTCTGAGGATCCGTGGATGTATCGTCGCT
ATCGTTCTCTTGACGATACAGACGGGATGATTACAGACAGTGAACGTGAAATGGAAGAGAAAATAAACAGGCTACGCGAC
GTTGTAAGAACGCCTGTTATTCGTATGCAAAAAAGACTGAAGCGTGCGGGAACAGTTAGGCAAATGTGCGAAGCAGTTTA
CTTATTTTTAGAAGAGCTTGACGTTCCGAAAAAATTAGAAGCATTACGTATTCGTGCAGAAGAGAGCGGAGATTTCTTAT
TTGCGACAGACCATGAGCAAGTATGGGAAGAAGTAATGAGTCTTCTTGATACGTTCGTTGAGATGCTTGGCGAAGAGAAA
ATGTCACTTTCTATGTTTACAGATGTTATGTCTACAGGTCTTGAGGCGCTTCAATTCGCAAACATTCCGCCGTCATTAGA
CCAAGTGTTAATTGCTAATATTGATCGTTCTAGATTATCAAATGTGAAAGCAACATTCGTCATTGGAGTGAATGAAGGTG
TGATTCCGGCAGCACCTATGGATGAAGGGATGCTTTCTGATGAGGAAAGAGATGTTCTTAGCGTTGCAGGTATTGAACTT
GCGCCAACGACGAGACAAACTTTATTAGAAGAACAGTTCGTTATGTACCAAATGGTAACGAGAGCAACTGAGAAATTATA
TATTTCATGCCCGCTCGCAGATGAGGAAGGGAAGACGTTACTAGCGTCTAGCTTTATTAAGAAAATAAAAAGGATGTTCC
CTGATGTGAAAGATACATTTATTACGAATGACGTAAATGATTTATCACGTTCGGAACAAATTTCATACGTAGCAACGCCA
GAAGTAACGTTGTCATATGTTATGCAGCAACTACAAACGTGGAAGCGATATGGATTTGAAGGGAATTTAGACTTTTGGTG
GGATGTCTATAATTTCTACGTAACTTCAGATGAATGGAAACAAAAAAGCAGCCGCGTATTATCAAGCTTATTCTACCGAA
ATCGTGCGCAAAAGCTAAGTACAGTTGTAAGTAGAGATTTATACGGAGACACAATAAAAGGAAGCGTCTCTCGTATGGAA
CTATTTAACCGTTGCGCATATGCTCATTTCGCGCAGCACGGTTTATCCTTAAGAGAGCGTGATATTTTCAAACTGGATGC
GCCAGATATCGGGGAACTATTCCATGCAGCGCTGAAGAGAATTGCAGACAGGCTATTACGTGAAAACCGTACTTGGGCGG
ATTTATCAATAAAAGAGTGTGAGCATCTTTCTGCTGTAGTAATAGAAGAAATTGCACCGTTATTACAAAGACAAATTTTA
TTAAGTTCAAATCGTCATTTCTACTTAAAACAAAAATTACAACAAATTATTTTCCGAACGTCAATCATTCTACGGGAACA
TGCGAAGTCGAGTGGTTTCGTACCAGTTGATTTAGAAGTGCCATTCGGTATGGGAGGTACAGGATCACTTCCACCGATGG
AATTCTCATTACCAAATGGTGTAAAGATGGAAGTTGTCGGGCGTATTGACCGTGTTGATAAGGCAGAAGATGAAAGCGGA
ACGTTCCTACGAATTATTGACTATAAATCAAGCTCAAAAGCGTTAGATTTAACGGAAGTGTATTACGGATTAGCACTTCA
AATGTTAACGTATTTAGATGTTGTTACTTCAAATGCACATACGTGGATGAAAAAAGGCCACGCAGCATCACCAGCGGGTG
TATTGTACTTCCATATTCATAACCCGATCGTTGAGGTGAAAGGTGACGCATCTGAAGCAGAAATTGAAAAGGAAATTTTG
AAGAAATTTAAAATGAAAGGTCTCGTACTAGGAGACGCTGACGTTGTTCGCTTAATGGATAACAAACTTTCAACAGGAAG
CTCAGATATTATTTCTGCTGGTCTGAAAAAAGACGGTAGCTTTAGTGCGCGTTCGAGTATTGCCAGTGAGCAAGAGTTTA
ACGTACTGCAAAAATATGTACACCATACGTTTGAAAATATCGGAAAAGATATTACAGAAGGTGTGATCGATATTGCCCCT
TACAAAAAGGGGAATAAAGCGGCGTGTACGTTCTGTAACTTCAAATCTGTTTGTCAGTTCGATGAATCACTTGAAGATAA
CCAGTTCCGTACGTTAAAAGAGATGAAAGATAGCGAAGCGATGGAGAAAATTAGAGAGGAGGTTGGCGGAGAATGA

Domains

Predicted by InterproScan.

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(795-1139)

UvrD-like helicase C-terminal domain (UvrD_C)

(302-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addB Bacillus subtilis subsp. subtilis str. 168

49.063

100

0.492

Multiple sequence alignment