Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ABER85_RS12900 | Genome accession | NZ_CP155547 |
| Coordinates | 2667881..2668207 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter sp. 8_A20231192 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2662881..2673207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABER85_RS12875 (ABER85_12875) | hemC | 2663498..2664415 (+) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
| ABER85_RS12880 (ABER85_12880) | - | 2664420..2665187 (+) | 768 | WP_103236045.1 | uroporphyrinogen-III synthase | - |
| ABER85_RS12885 (ABER85_12885) | - | 2665196..2666035 (+) | 840 | WP_001230201.1 | hypothetical protein | - |
| ABER85_RS12890 (ABER85_12890) | - | 2666045..2667238 (+) | 1194 | WP_000681775.1 | membrane protein | - |
| ABER85_RS12895 (ABER85_12895) | - | 2667246..2667686 (+) | 441 | WP_000661569.1 | thioesterase family protein | - |
| ABER85_RS12900 (ABER85_12900) | hns | 2667881..2668207 (+) | 327 | WP_000801427.1 | H-NS histone family protein | Regulator |
| ABER85_RS12905 (ABER85_12905) | gspN | 2668539..2669282 (+) | 744 | WP_346534710.1 | type II secretion system protein N | - |
| ABER85_RS12910 (ABER85_12910) | - | 2669282..2670118 (+) | 837 | WP_000870031.1 | type II secretion system protein N | - |
| ABER85_RS12915 (ABER85_12915) | gspD | 2670160..2672436 (+) | 2277 | WP_001196428.1 | type II secretion system secretin GspD | - |
| ABER85_RS12920 (ABER85_12920) | - | 2672477..2673106 (+) | 630 | WP_272236205.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=997666 ABER85_RS12900 WP_000801427.1 2667881..2668207(+) (hns) [Acinetobacter sp. 8_A20231192]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=997666 ABER85_RS12900 WP_000801427.1 2667881..2668207(+) (hns) [Acinetobacter sp. 8_A20231192]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |