Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ABC811_RS04285 Genome accession   NZ_CP155535
Coordinates   833534..834343 (+) Length   269 a.a.
NCBI ID   WP_001289493.1    Uniprot ID   Q9RCS5
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 828534..839343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS04265 (ABC811_04265) - 830034..830159 (-) 126 WP_001818232.1 hypothetical protein -
  ABC811_RS04270 (ABC811_04270) mutY 830256..831431 (+) 1176 WP_000886148.1 A/G-specific adenine glycosylase -
  ABC811_RS04275 (ABC811_04275) micA 831486..832190 (+) 705 WP_050144106.1 response regulator YycF Regulator
  ABC811_RS04280 (ABC811_04280) micB 832183..833532 (+) 1350 WP_000886210.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ABC811_RS04285 (ABC811_04285) vicX 833534..834343 (+) 810 WP_001289493.1 MBL fold metallo-hydrolase Regulator
  ABC811_RS04290 (ABC811_04290) relB 834434..834676 (+) 243 WP_000208080.1 type II toxin-antitoxin system RelB family antitoxin -
  ABC811_RS04295 (ABC811_04295) - 834678..834932 (+) 255 WP_001809704.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ABC811_RS04300 (ABC811_04300) - 834979..835752 (+) 774 WP_000731131.1 ion transporter -
  ABC811_RS04305 (ABC811_04305) - 836012..836998 (-) 987 WP_000204724.1 L-lactate dehydrogenase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29916.89 Da        Isoelectric Point: 6.1743

>NTDB_id=997319 ABC811_RS04285 WP_001289493.1 833534..834343(+) (vicX) [Streptococcus pneumoniae strain PJ755/1]
MSEIGFKYSILASGSSGNSFYLETSKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIEANHDVEILRSGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=997319 ABC811_RS04285 WP_001289493.1 833534..834343(+) (vicX) [Streptococcus pneumoniae strain PJ755/1]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCTTTTTATCTGGAAACCTCAAAAAA
GAAGCTTTTAGTAGATGCAGGCTTGTCTGGCAAGAAAATTACCAGTCTGCTAGCTGAAATTAACCGTAAGCCAGAAGACC
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAATATCTTGGCAAGGTGGATTCTTCGCAAAAGCATAT
TTTTGAAATGGGTAAAACCAAAACCTTTGGAGATATCGACATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGATAAGAGTTTTGTCCTCTTGACAGATACAGGTTATGTCAGTGACCGTATGGCGGGC
ATTGTCGAAAATGCGGATGGTTATCTTATCGAGGCCAACCATGATGTAGAGATTTTGCGATCAGGTTCTTACGCTTGGCG
CCTCAAACAACGAATCCTATCTGACCTTGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGGACGCTAGGAA
ATCGTACTAAGAAGATTTACCTTGGGCATTTATCTAAGGAAAACAATATCAAGGAACTGGCTCATATGACCATGGTCAAT
CAGCTGGCTCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGAGATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9RCS5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.323

100

0.773

Multiple sequence alignment