Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ABC803_RS01230 | Genome accession | NZ_CP155531 |
| Coordinates | 227704..228657 (+) | Length | 317 a.a. |
| NCBI ID | WP_000345119.1 | Uniprot ID | A0A0T7TMT7 |
| Organism | Streptococcus pneumoniae strain SN36255 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 222704..233657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC803_RS01185 (ABC803_01185) | - | 222768..223133 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC803_RS01190 (ABC803_01190) | comGA/cglA/cilD | 223209..224150 (+) | 942 | WP_000249567.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC803_RS01195 (ABC803_01195) | comGB/cglB | 224098..225114 (+) | 1017 | WP_013193332.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC803_RS01200 (ABC803_01200) | comGC/cglC | 225116..225442 (+) | 327 | WP_000738650.1 | comG operon protein ComGC | Machinery gene |
| ABC803_RS01205 (ABC803_01205) | comGD/cglD | 225435..225839 (+) | 405 | WP_000588005.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC803_RS01210 (ABC803_01210) | comGE/cglE | 225802..226104 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC803_RS01215 (ABC803_01215) | comGF/cglF | 226067..226528 (+) | 462 | WP_000250545.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC803_RS01220 (ABC803_01220) | comGG/cglG | 226506..226919 (+) | 414 | WP_000265630.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC803_RS01225 (ABC803_01225) | - | 227056..227643 (+) | 588 | WP_000679774.1 | class I SAM-dependent methyltransferase | - |
| ABC803_RS01230 (ABC803_01230) | comYH | 227704..228657 (+) | 954 | WP_000345119.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC803_RS01235 (ABC803_01235) | - | 228708..229898 (+) | 1191 | WP_000167766.1 | acetate kinase | - |
| ABC803_RS01240 (ABC803_01240) | - | 229899..230030 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| ABC803_RS01245 (ABC803_01245) | rnpA | 230047..230418 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| ABC803_RS01250 (ABC803_01250) | - | 230393..231217 (+) | 825 | WP_000727904.1 | membrane protein insertase YidC | - |
| ABC803_RS01255 (ABC803_01255) | jag | 231236..232222 (+) | 987 | WP_000260019.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ABC803_RS01260 (ABC803_01260) | - | 232273..232896 (+) | 624 | WP_000932633.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35746.93 Da Isoelectric Point: 4.2434
>NTDB_id=997009 ABC803_RS01230 WP_000345119.1 227704..228657(+) (comYH) [Streptococcus pneumoniae strain SN36255]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEMDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEMDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=997009 ABC803_RS01230 WP_000345119.1 227704..228657(+) (comYH) [Streptococcus pneumoniae strain SN36255]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCAGATGCCATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAATGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCAGATGCCATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAATGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.313 |
98.738 |
0.536 |
| comYH | Streptococcus mutans UA159 |
53.994 |
98.738 |
0.533 |