Detailed information NTG0997007

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABC803_RS01215
• Genome accession: NZ_CP155531
• Coordinates: 226067..226528 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250545.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SN36255
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 221067..231528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC803_RS01180 (ABC803_01180)	-	221559..222617 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC803_RS01185 (ABC803_01185)	-	222768..223133 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC803_RS01190 (ABC803_01190)	comGA/cglA/cilD	223209..224150 (+)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC803_RS01195 (ABC803_01195)	comGB/cglB	224098..225114 (+)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC803_RS01200 (ABC803_01200)	comGC/cglC	225116..225442 (+)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
ABC803_RS01205 (ABC803_01205)	comGD/cglD	225435..225839 (+)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC803_RS01210 (ABC803_01210)	comGE/cglE	225802..226104 (+)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC803_RS01215 (ABC803_01215)	comGF/cglF	226067..226528 (+)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC803_RS01220 (ABC803_01220)	comGG/cglG	226506..226919 (+)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC803_RS01225 (ABC803_01225)	-	227056..227643 (+)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
ABC803_RS01230 (ABC803_01230)	comYH	227704..228657 (+)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
ABC803_RS01235 (ABC803_01235)	-	228708..229898 (+)	1191	WP_000167766.1	acetate kinase	-
ABC803_RS01240 (ABC803_01240)	-	229899..230030 (+)	132	WP_000768904.1	hypothetical protein	-
ABC803_RS01245 (ABC803_01245)	rnpA	230047..230418 (+)	372	WP_000739246.1	ribonuclease P protein component	-
ABC803_RS01250 (ABC803_01250)	-	230393..231217 (+)	825	WP_000727904.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17855.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=997007 ABC803_RS01215 WP_000250545.1 226067..226528(+) (comGF/cglF) [Streptococcus pneumoniae strain SN36255]
MVQNSCWQSKSHKVKAFTLLESLLALLVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RFYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=997007 ABC803_RS01215 WP_000250545.1 226067..226528(+) (comGF/cglF) [Streptococcus pneumoniae strain SN36255]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTGCT
CGTCATCAGTGGAGGCTTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTGGAAGGCAAT
CGTTTCTATATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae D39	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae R6	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae TIGR4	93.464	100	0.935
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915