Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NSS89_RS11845 | Genome accession | NZ_CP155471 |
| Coordinates | 2379495..2379794 (+) | Length | 99 a.a. |
| NCBI ID | WP_034771010.1 | Uniprot ID | - |
| Organism | Caldifermentibacillus hisashii strain FSL K6-2831 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2374495..2384794
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS89_RS11815 (NSS89_11815) | - | 2374861..2375664 (+) | 804 | WP_346206389.1 | YqhG family protein | - |
| NSS89_RS11820 (NSS89_11820) | - | 2375843..2376013 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| NSS89_RS11825 (NSS89_11825) | - | 2376084..2376326 (-) | 243 | WP_034771001.1 | DUF2626 domain-containing protein | - |
| NSS89_RS11830 (NSS89_11830) | - | 2376465..2377166 (-) | 702 | WP_034771004.1 | helix-turn-helix domain-containing protein | - |
| NSS89_RS11835 (NSS89_11835) | comGA | 2377377..2378462 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSS89_RS11840 (NSS89_11840) | comGB | 2378437..2379468 (+) | 1032 | WP_034771008.1 | competence type IV pilus assembly protein ComGB | - |
| NSS89_RS11845 (NSS89_11845) | comGC | 2379495..2379794 (+) | 300 | WP_034771010.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSS89_RS11850 (NSS89_11850) | comGD | 2379769..2380272 (+) | 504 | WP_034771013.1 | competence type IV pilus minor pilin ComGD | - |
| NSS89_RS11855 (NSS89_11855) | - | 2380247..2380603 (+) | 357 | WP_034771015.1 | hypothetical protein | - |
| NSS89_RS11860 (NSS89_11860) | comGF | 2380575..2381039 (+) | 465 | WP_034771017.1 | competence type IV pilus minor pilin ComGF | - |
| NSS89_RS11865 (NSS89_11865) | comGG | 2380987..2381460 (+) | 474 | WP_176458882.1 | competence type IV pilus minor pilin ComGG | - |
| NSS89_RS11870 (NSS89_11870) | - | 2381561..2381746 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NSS89_RS11875 (NSS89_11875) | - | 2381777..2382901 (-) | 1125 | WP_034771027.1 | hypothetical protein | - |
| NSS89_RS11880 (NSS89_11880) | - | 2383069..2384256 (-) | 1188 | WP_034771029.1 | M14 family metallopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11080.04 Da Isoelectric Point: 5.6913
>NTDB_id=996804 NSS89_RS11845 WP_034771010.1 2379495..2379794(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2831]
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQKNISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
MLKKESAFTLIEMMIVLFVITILLLITIPNVTKHQKNISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
Nucleotide
Download Length: 300 bp
>NTDB_id=996804 NSS89_RS11845 WP_034771010.1 2379495..2379794(+) (comGC) [Caldifermentibacillus hisashii strain FSL K6-2831]
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTGTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGAAAAATATCAGCAATAAAGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCCGCTTCTATTGATGACTTGAAAAACGGTTATTTAAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAGAGTGA
ATGTTGAAAAAAGAATCTGCATTTACGTTAATCGAGATGATGATCGTTCTGTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGAAAAATATCAGCAATAAAGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCCGCTTCTATTGATGACTTGAAAAACGGTTATTTAAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGACGCAGTTATCAAAGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
53.684 |
95.96 |
0.515 |
| comGC | Staphylococcus aureus MW2 |
46.939 |
98.99 |
0.465 |
| comGC | Staphylococcus aureus N315 |
46.939 |
98.99 |
0.465 |