Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ14_RS11280 | Genome accession | NZ_CP155467 |
| Coordinates | 2363229..2364314 (+) | Length | 361 a.a. |
| NCBI ID | WP_034771006.1 | Uniprot ID | A0A090IWD5 |
| Organism | Caldifermentibacillus hisashii strain FSL W8-0862 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2358229..2369314
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ14_RS11255 (NSQ14_11255) | - | 2358690..2360384 (+) | 1695 | WP_034770994.1 | DEAD/DEAH box helicase | - |
| NSQ14_RS11260 (NSQ14_11260) | - | 2360353..2361156 (+) | 804 | WP_034770996.1 | YqhG family protein | - |
| NSQ14_RS11265 (NSQ14_11265) | - | 2361695..2361865 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| NSQ14_RS11270 (NSQ14_11270) | - | 2361936..2362178 (-) | 243 | WP_034771001.1 | DUF2626 domain-containing protein | - |
| NSQ14_RS11275 (NSQ14_11275) | - | 2362317..2363018 (-) | 702 | WP_034771004.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NSQ14_RS11280 (NSQ14_11280) | comGA | 2363229..2364314 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ14_RS11285 (NSQ14_11285) | comGB | 2364289..2365320 (+) | 1032 | WP_034771008.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ14_RS11290 (NSQ14_11290) | comGC | 2365347..2365646 (+) | 300 | WP_041903955.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ14_RS11295 (NSQ14_11295) | comGD | 2365621..2366124 (+) | 504 | WP_346216340.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ14_RS11300 (NSQ14_11300) | - | 2366099..2366455 (+) | 357 | WP_269919086.1 | hypothetical protein | - |
| NSQ14_RS11305 (NSQ14_11305) | comGF | 2366427..2366891 (+) | 465 | WP_269919087.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ14_RS11310 (NSQ14_11310) | comGG | 2366839..2367312 (+) | 474 | WP_269919088.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ14_RS11315 (NSQ14_11315) | - | 2367410..2367595 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NSQ14_RS11320 (NSQ14_11320) | - | 2367626..2368750 (-) | 1125 | WP_346216341.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40615.22 Da Isoelectric Point: 7.5768
>NTDB_id=996631 NSQ14_RS11280 WP_034771006.1 2363229..2364314(+) (comGA) [Caldifermentibacillus hisashii strain FSL W8-0862]
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
Nucleotide
Download Length: 1086 bp
>NTDB_id=996631 NSQ14_RS11280 WP_034771006.1 2363229..2364314(+) (comGA) [Caldifermentibacillus hisashii strain FSL W8-0862]
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTTGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAAGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTTGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAAGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.695 |
97.23 |
0.551 |