Detailed information NTG0996473

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABDE90_RS08330
• Genome accession: NZ_CP155458
• Coordinates: 1764007..1764708 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00329
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1759007..1769708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDE90_RS08295 (ABDE90_08285)	kdsB	1759530..1760291 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABDE90_RS08300 (ABDE90_08290)	-	1760303..1761283 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABDE90_RS08305 (ABDE90_08295)	-	1761295..1761636 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ABDE90_RS08310 (ABDE90_08300)	-	1761654..1762427 (+)	774	WP_000497298.1	TatD family hydrolase	-
ABDE90_RS08315 (ABDE90_08305)	-	1762465..1763073 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABDE90_RS08320 (ABDE90_08310)	-	1763083..1763637 (+)	555	WP_000841373.1	type II secretion system protein	-
ABDE90_RS08325 (ABDE90_08315)	xcpV	1763627..1764007 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABDE90_RS08330 (ABDE90_08320)	xcpW	1764007..1764708 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABDE90_RS08335 (ABDE90_08325)	gspK	1764708..1765667 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABDE90_RS08340 (ABDE90_08330)	-	1765898..1766494 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABDE90_RS08345 (ABDE90_08335)	ung	1766545..1767258 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABDE90_RS08350 (ABDE90_08340)	-	1767255..1768379 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABDE90_RS08355 (ABDE90_08345)	tadA	1768386..1768889 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABDE90_RS08360 (ABDE90_08350)	-	1768958..1769401 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=996473 ABDE90_RS08330 WP_000594589.1 1764007..1764708(+) (xcpW) [Acinetobacter baumannii strain 2024CK-00329]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=996473 ABDE90_RS08330 WP_000594589.1 1764007..1764708(+) (xcpW) [Acinetobacter baumannii strain 2024CK-00329]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996