Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LLNCDO184_RS11600 | Genome accession | NZ_CP155124 |
| Coordinates | 2244527..2244823 (-) | Length | 98 a.a. |
| NCBI ID | WP_010906316.1 | Uniprot ID | A0A3N6L9Y1 |
| Organism | Lactococcus lactis subsp. lactis strain NCDO184 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2239527..2249823
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLNCDO184_RS11565 (LLNCDO184_11555) | - | 2239817..2240683 (+) | 867 | WP_010906309.1 | RluA family pseudouridine synthase | - |
| LLNCDO184_RS11570 (LLNCDO184_11560) | - | 2240722..2241531 (-) | 810 | WP_010906310.1 | metal ABC transporter permease | - |
| LLNCDO184_RS11575 (LLNCDO184_11565) | - | 2241524..2242261 (-) | 738 | WP_010906311.1 | metal ABC transporter ATP-binding protein | - |
| LLNCDO184_RS11580 (LLNCDO184_11570) | - | 2242438..2243280 (-) | 843 | WP_063283655.1 | metal ABC transporter substrate-binding protein | - |
| LLNCDO184_RS11585 (LLNCDO184_11575) | - | 2243277..2243714 (-) | 438 | WP_010906313.1 | zinc-dependent MarR family transcriptional regulator | - |
| LLNCDO184_RS11590 (LLNCDO184_11580) | comGG | 2243795..2244079 (-) | 285 | WP_010906314.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LLNCDO184_RS11595 (LLNCDO184_11585) | comGF | 2244118..2244564 (-) | 447 | WP_031296844.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LLNCDO184_RS11600 (LLNCDO184_11590) | comGE | 2244527..2244823 (-) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LLNCDO184_RS11605 (LLNCDO184_11595) | comGD | 2244795..2245193 (-) | 399 | WP_021214886.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LLNCDO184_RS11610 (LLNCDO184_11600) | comGC | 2245186..2245569 (-) | 384 | WP_010906318.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LLNCDO184_RS11615 (LLNCDO184_11605) | comGB | 2245583..2246656 (-) | 1074 | WP_010906319.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LLNCDO184_RS11620 (LLNCDO184_11610) | comGA | 2246550..2247488 (-) | 939 | WP_031561106.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11076.95 Da Isoelectric Point: 6.4684
>NTDB_id=996286 LLNCDO184_RS11600 WP_010906316.1 2244527..2244823(-) (comGE) [Lactococcus lactis subsp. lactis strain NCDO184]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=996286 LLNCDO184_RS11600 WP_010906316.1 2244527..2244823(-) (comGE) [Lactococcus lactis subsp. lactis strain NCDO184]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
68.041 |
98.98 |
0.673 |