Detailed information NTG0995921

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: ABC967_RS07215
• Genome accession: NZ_CP155059
• Coordinates: 1514984..1515481 (-)
• Length: 165 a.a.
• NCBI ID: WP_078061106.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CC133-MSSA
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1509984..1520481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC967_RS07190 (ABC967_07190)	gcvPB	1510147..1511619 (-)	1473	WP_000202177.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
ABC967_RS07195 (ABC967_07195)	gcvPA	1511612..1512958 (-)	1347	WP_000019697.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ABC967_RS07200 (ABC967_07200)	gcvT	1512978..1514069 (-)	1092	WP_000093343.1	glycine cleavage system aminomethyltransferase GcvT	-
ABC967_RS07205 (ABC967_07205)	-	1514227..1514751 (-)	525	WP_001015120.1	shikimate kinase	-
ABC967_RS07210 (ABC967_07210)	-	1514741..1514887 (-)	147	WP_001789879.1	hypothetical protein	-
ABC967_RS07215 (ABC967_07215)	comGF	1514984..1515481 (-)	498	WP_078061106.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC967_RS07220 (ABC967_07220)	comGE	1515399..1515698 (-)	300	WP_000844409.1	hypothetical protein	Machinery gene
ABC967_RS07225 (ABC967_07225)	comGD	1515685..1516131 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC967_RS07230 (ABC967_07230)	comGC	1516109..1516420 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ABC967_RS07235 (ABC967_07235)	comGB	1516434..1517504 (-)	1071	WP_000776418.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC967_RS07240 (ABC967_07240)	comGA	1517476..1518450 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC967_RS07245 (ABC967_07245)	-	1518502..1519125 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ABC967_RS07250 (ABC967_07250)	-	1519122..1519451 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ABC967_RS07255 (ABC967_07255)	-	1519451..1520437 (-)	987	WP_000161315.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19167.92 Da
• Isoelectric Point: 10.2192

>NTDB_id=995921 ABC967_RS07215 WP_078061106.1 1514984..1515481(-) (comGF) [Staphylococcus aureus strain CC133-MSSA]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISIILLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMLNNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYA

Nucleotide

• Length: 498 bp

>NTDB_id=995921 ABC967_RS07215 WP_078061106.1 1514984..1515481(-) (comGF) [Staphylococcus aureus strain CC133-MSSA]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAATTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAACAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGCTTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGCATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (69-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	98.171	99.394	0.976
comGF	Staphylococcus aureus MW2	96.951	99.394	0.964