Detailed information NTG0099587

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: HAS68_RS10800
• Genome accession: NZ_CP002007
• Coordinates: 2160565..2161659 (+)
• Length: 364 a.a.
• NCBI ID: WP_002936177.1
• Uniprot ID: -
• Organism: Streptococcus suis 05HAS68
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2155565..2166659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HAS68_RS10765 (HAS68_1994)	-	2155651..2156397 (-)	747	WP_013730689.1	Bro-N domain-containing protein	-
HAS68_RS10775 (HAS68_1995)	-	2156416..2156643 (-)	228	WP_013730690.1	helix-turn-helix transcriptional regulator	-
HAS68_RS10780 (HAS68_1996)	-	2156797..2157510 (+)	714	WP_013730691.1	helix-turn-helix transcriptional regulator	-
HAS68_RS10785 (HAS68_1997)	-	2157874..2158704 (+)	831	WP_013730692.1	KilA-N domain-containing protein	-
HAS68_RS10790 (HAS68_1998)	-	2158869..2160041 (+)	1173	WP_013730693.1	site-specific integrase	-
HAS68_RS10795 (HAS68_1999)	yaaA	2160179..2160562 (+)	384	WP_002936175.1	S4 domain-containing protein YaaA	-
HAS68_RS10800 (HAS68_2000)	recF	2160565..2161659 (+)	1095	WP_002936177.1	DNA replication/repair protein RecF	Machinery gene
HAS68_RS10805 (HAS68_2001)	-	2162098..2163300 (-)	1203	WP_009909264.1	IS110-like element ISSsu7 family transposase	-
HAS68_RS10810 (HAS68_2002)	guaB	2163551..2165032 (-)	1482	WP_014637236.1	IMP dehydrogenase	-
HAS68_RS10815 (HAS68_2003)	trpS	2165264..2166289 (-)	1026	WP_013730696.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42217.34 Da
• Isoelectric Point: 7.2235

>NTDB_id=99587 HAS68_RS10800 WP_002936177.1 2160565..2161659(+) (recF) [Streptococcus suis 05HAS68]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=99587 HAS68_RS10800 WP_002936177.1 2160565..2161659(+) (recF) [Streptococcus suis 05HAS68]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.083	99.176	0.695
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442