Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   AAHT64_RS08165 Genome accession   NZ_CP155054
Coordinates   1555369..1555542 (-) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 1550369..1560542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS08120 (AAHT64_08120) comGE 1550720..1551067 (+) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  AAHT64_RS08125 (AAHT64_08125) comGF 1551093..1551476 (+) 384 WP_003230168.1 ComG operon protein ComGF Machinery gene
  AAHT64_RS08130 (AAHT64_08130) comGG 1551477..1551851 (+) 375 WP_003230170.1 ComG operon protein ComGG Machinery gene
  AAHT64_RS08135 (AAHT64_08135) spoIIT 1551922..1552101 (+) 180 WP_003230176.1 YqzE family protein -
  AAHT64_RS08140 (AAHT64_08140) yqzG 1552143..1552469 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  AAHT64_RS08145 (AAHT64_08145) tapA 1552741..1553502 (+) 762 WP_003230180.1 amyloid fiber anchoring/assembly protein TapA -
  AAHT64_RS08150 (AAHT64_08150) sipW 1553486..1554058 (+) 573 WP_003230181.1 signal peptidase I -
  AAHT64_RS08155 (AAHT64_08155) tasA 1554122..1554907 (+) 786 WP_003230183.1 biofilm matrix protein TasA -
  AAHT64_RS08160 (AAHT64_08160) sinR 1555000..1555335 (-) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  AAHT64_RS08165 (AAHT64_08165) sinI 1555369..1555542 (-) 174 WP_003230187.1 anti-repressor SinI family protein Regulator
  AAHT64_RS08170 (AAHT64_08170) yqhG 1555725..1556519 (-) 795 WP_003230200.1 YqhG family protein -
  AAHT64_RS08175 (AAHT64_08175) yqhH 1556540..1558213 (-) 1674 WP_003230203.1 SNF2-related protein -
  AAHT64_RS08180 (AAHT64_08180) gcvT 1558655..1559743 (+) 1089 WP_003230205.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=995849 AAHT64_RS08165 WP_003230187.1 1555369..1555542(-) (sinI) [Bacillus subtilis subsp. subtilis strain R38]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=995849 AAHT64_RS08165 WP_003230187.1 1555369..1555542(-) (sinI) [Bacillus subtilis subsp. subtilis strain R38]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment