Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AAHT64_RS01285 Genome accession   NZ_CP155054
Coordinates   260631..260750 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 255631..265750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS01265 (AAHT64_01265) pbpG 255987..258062 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  AAHT64_RS01270 (AAHT64_01270) speE 258264..259094 (+) 831 WP_003227543.1 spermidine synthase -
  AAHT64_RS01275 (AAHT64_01275) speB 259155..260027 (+) 873 WP_003227545.1 agmatinase -
  AAHT64_RS01280 (AAHT64_01280) ywhH 260059..260532 (-) 474 WP_003227547.1 YbaK/EbsC family protein -
  AAHT64_RS01285 (AAHT64_01285) phrF 260631..260750 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AAHT64_RS01290 (AAHT64_01290) rapF 260734..261879 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  AAHT64_RS01295 (AAHT64_01295) - 261882..262112 (+) 231 WP_009968328.1 hypothetical protein -
  AAHT64_RS01300 (AAHT64_01300) ywhK 262109..263464 (+) 1356 WP_003227552.1 YncE family protein -
  AAHT64_RS01305 (AAHT64_01305) ywhL 263503..264879 (+) 1377 WP_003244415.1 YncE family protein -
  AAHT64_RS01310 (AAHT64_01310) albG 264885..265586 (-) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=995814 AAHT64_RS01285 WP_009968329.1 260631..260750(-) (phrF) [Bacillus subtilis subsp. subtilis strain R38]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=995814 AAHT64_RS01285 WP_009968329.1 260631..260750(-) (phrF) [Bacillus subtilis subsp. subtilis strain R38]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment