Detailed information NTG0995559

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAVB50_RS17590
• Genome accession: NZ_CP154923
• Coordinates: 3284386..3285339 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain FUA2233
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3279386..3290339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB50_RS17560 (AAVB50_17555)	appD	3279505..3280491 (-)	987	WP_198878863.1	oligopeptide ABC transporter ATP-binding protein AppD	-
AAVB50_RS17565 (AAVB50_17560)	yjaZ	3280683..3281468 (-)	786	WP_077670617.1	DUF2268 domain-containing protein	-
AAVB50_RS17570 (AAVB50_17565)	fabF	3281544..3282785 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AAVB50_RS17575 (AAVB50_17570)	fabH	3282808..3283746 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AAVB50_RS17580 (AAVB50_17575)	yjzB	3283911..3284150 (+)	240	WP_003232972.1	spore coat protein YjzB	-
AAVB50_RS17585 (AAVB50_17580)	comZ	3284180..3284371 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AAVB50_RS17590 (AAVB50_17585)	med	3284386..3285339 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
AAVB50_RS17595 (AAVB50_17590)	-	3285429..3285986 (-)	558	WP_014479435.1	hypothetical protein	-
AAVB50_RS17600 (AAVB50_17595)	-	3286068..3286802 (-)	735	WP_032721340.1	hypothetical protein	-
AAVB50_RS17605 (AAVB50_17600)	yjzD	3287051..3287236 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AAVB50_RS17610 (AAVB50_17605)	yjzC	3287283..3287462 (-)	180	WP_003245356.1	YjzC family protein	-
AAVB50_RS17615 (AAVB50_17610)	argF	3287547..3288506 (-)	960	WP_198878861.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=995559 AAVB50_RS17590 WP_014476425.1 3284386..3285339(-) (med) [Bacillus subtilis strain FUA2233]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=995559 AAVB50_RS17590 WP_014476425.1 3284386..3285339(-) (med) [Bacillus subtilis strain FUA2233]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997