Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAVB50_RS17585 Genome accession   NZ_CP154923
Coordinates   3284180..3284371 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain FUA2233     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3279180..3289371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB50_RS17560 (AAVB50_17555) appD 3279505..3280491 (-) 987 WP_198878863.1 oligopeptide ABC transporter ATP-binding protein AppD -
  AAVB50_RS17565 (AAVB50_17560) yjaZ 3280683..3281468 (-) 786 WP_077670617.1 DUF2268 domain-containing protein -
  AAVB50_RS17570 (AAVB50_17565) fabF 3281544..3282785 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  AAVB50_RS17575 (AAVB50_17570) fabH 3282808..3283746 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  AAVB50_RS17580 (AAVB50_17575) yjzB 3283911..3284150 (+) 240 WP_003232972.1 spore coat protein YjzB -
  AAVB50_RS17585 (AAVB50_17580) comZ 3284180..3284371 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AAVB50_RS17590 (AAVB50_17585) med 3284386..3285339 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  AAVB50_RS17595 (AAVB50_17590) - 3285429..3285986 (-) 558 WP_014479435.1 hypothetical protein -
  AAVB50_RS17600 (AAVB50_17595) - 3286068..3286802 (-) 735 WP_032721340.1 hypothetical protein -
  AAVB50_RS17605 (AAVB50_17600) yjzD 3287051..3287236 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  AAVB50_RS17610 (AAVB50_17605) yjzC 3287283..3287462 (-) 180 WP_003245356.1 YjzC family protein -
  AAVB50_RS17615 (AAVB50_17610) argF 3287547..3288506 (-) 960 WP_198878861.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=995558 AAVB50_RS17585 WP_003224559.1 3284180..3284371(-) (comZ) [Bacillus subtilis strain FUA2233]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=995558 AAVB50_RS17585 WP_003224559.1 3284180..3284371(-) (comZ) [Bacillus subtilis strain FUA2233]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment