Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AAVB50_RS10205 | Genome accession | NZ_CP154923 |
| Coordinates | 1882785..1883822 (+) | Length | 345 a.a. |
| NCBI ID | WP_345806075.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain FUA2233 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1877785..1888822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVB50_RS10180 (AAVB50_10175) | rsbRD | 1878004..1878840 (+) | 837 | WP_345806074.1 | RsbT co-antagonist protein RsbRD | - |
| AAVB50_RS10185 (AAVB50_10180) | yqhB | 1878893..1880221 (-) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| AAVB50_RS10190 (AAVB50_10185) | corA | 1880364..1881317 (+) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| AAVB50_RS10195 (AAVB50_10190) | - | 1881319..1881516 (+) | 198 | WP_129134319.1 | hypothetical protein | - |
| AAVB50_RS10200 (AAVB50_10195) | comGA | 1881728..1882798 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| AAVB50_RS10205 (AAVB50_10200) | comGB | 1882785..1883822 (+) | 1038 | WP_345806075.1 | comG operon protein ComGB | Machinery gene |
| AAVB50_RS10210 (AAVB50_10205) | comGC | 1883836..1884132 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AAVB50_RS10215 (AAVB50_10210) | comGD | 1884122..1884553 (+) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| AAVB50_RS10220 (AAVB50_10215) | comGE | 1884537..1884884 (+) | 348 | WP_345806076.1 | ComG operon protein 5 | Machinery gene |
| AAVB50_RS10225 (AAVB50_10220) | comGF | 1884910..1885293 (+) | 384 | WP_345806077.1 | ComG operon protein ComGF | Machinery gene |
| AAVB50_RS10230 (AAVB50_10225) | comGG | 1885294..1885668 (+) | 375 | WP_345806078.1 | ComG operon protein ComGG | Machinery gene |
| AAVB50_RS10235 (AAVB50_10230) | spoIIT | 1885739..1885918 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| AAVB50_RS10240 (AAVB50_10235) | yqzG | 1885960..1886286 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AAVB50_RS10245 (AAVB50_10240) | tapA | 1886558..1887319 (+) | 762 | WP_345806079.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAVB50_RS10250 (AAVB50_10245) | sipW | 1887303..1887875 (+) | 573 | WP_072692741.1 | signal peptidase I | - |
| AAVB50_RS10255 (AAVB50_10250) | tasA | 1887939..1888724 (+) | 786 | WP_345806080.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39749.23 Da Isoelectric Point: 9.5312
>NTDB_id=995532 AAVB50_RS10205 WP_345806075.1 1882785..1883822(+) (comGB) [Bacillus subtilis strain FUA2233]
MKKIRKVWLLKDQARLLMRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLMRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=995532 AAVB50_RS10205 WP_345806075.1 1882785..1883822(+) (comGB) [Bacillus subtilis strain FUA2233]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAATGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAATGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |