Detailed information NTG0995482

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAVB74_RS17820
• Genome accession: NZ_CP154920
• Coordinates: 3348891..3349844 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain FUA2232
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3343891..3354844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB74_RS17790 (AAVB74_17790)	appD	3344010..3344996 (-)	987	WP_198878863.1	oligopeptide ABC transporter ATP-binding protein AppD	-
AAVB74_RS17795 (AAVB74_17795)	yjaZ	3345188..3345973 (-)	786	WP_077670617.1	DUF2268 domain-containing protein	-
AAVB74_RS17800 (AAVB74_17800)	fabF	3346049..3347290 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AAVB74_RS17805 (AAVB74_17805)	fabH	3347313..3348251 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AAVB74_RS17810 (AAVB74_17810)	yjzB	3348416..3348655 (+)	240	WP_003232972.1	spore coat protein YjzB	-
AAVB74_RS17815 (AAVB74_17815)	comZ	3348685..3348876 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AAVB74_RS17820 (AAVB74_17820)	med	3348891..3349844 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
AAVB74_RS17825 (AAVB74_17825)	-	3349934..3350491 (-)	558	WP_014479435.1	hypothetical protein	-
AAVB74_RS17830 (AAVB74_17830)	-	3350573..3351307 (-)	735	WP_032721340.1	hypothetical protein	-
AAVB74_RS17835 (AAVB74_17835)	yjzD	3351556..3351741 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AAVB74_RS17840 (AAVB74_17840)	yjzC	3351788..3351967 (-)	180	WP_003245356.1	YjzC family protein	-
AAVB74_RS17845 (AAVB74_17845)	argF	3352052..3353011 (-)	960	WP_198878861.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=995482 AAVB74_RS17820 WP_014476425.1 3348891..3349844(-) (med) [Bacillus subtilis strain FUA2232]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=995482 AAVB74_RS17820 WP_014476425.1 3348891..3349844(-) (med) [Bacillus subtilis strain FUA2232]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997