Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAVB74_RS17815 Genome accession   NZ_CP154920
Coordinates   3348685..3348876 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain FUA2232     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3343685..3353876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB74_RS17790 (AAVB74_17790) appD 3344010..3344996 (-) 987 WP_198878863.1 oligopeptide ABC transporter ATP-binding protein AppD -
  AAVB74_RS17795 (AAVB74_17795) yjaZ 3345188..3345973 (-) 786 WP_077670617.1 DUF2268 domain-containing protein -
  AAVB74_RS17800 (AAVB74_17800) fabF 3346049..3347290 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  AAVB74_RS17805 (AAVB74_17805) fabH 3347313..3348251 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  AAVB74_RS17810 (AAVB74_17810) yjzB 3348416..3348655 (+) 240 WP_003232972.1 spore coat protein YjzB -
  AAVB74_RS17815 (AAVB74_17815) comZ 3348685..3348876 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AAVB74_RS17820 (AAVB74_17820) med 3348891..3349844 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  AAVB74_RS17825 (AAVB74_17825) - 3349934..3350491 (-) 558 WP_014479435.1 hypothetical protein -
  AAVB74_RS17830 (AAVB74_17830) - 3350573..3351307 (-) 735 WP_032721340.1 hypothetical protein -
  AAVB74_RS17835 (AAVB74_17835) yjzD 3351556..3351741 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  AAVB74_RS17840 (AAVB74_17840) yjzC 3351788..3351967 (-) 180 WP_003245356.1 YjzC family protein -
  AAVB74_RS17845 (AAVB74_17845) argF 3352052..3353011 (-) 960 WP_198878861.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=995481 AAVB74_RS17815 WP_003224559.1 3348685..3348876(-) (comZ) [Bacillus subtilis strain FUA2232]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=995481 AAVB74_RS17815 WP_003224559.1 3348685..3348876(-) (comZ) [Bacillus subtilis strain FUA2232]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment