Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAVC46_RS01240 Genome accession   NZ_CP154913
Coordinates   240056..240253 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus pumilus strain FUA2119     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 235056..245253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC46_RS01210 (AAVC46_01210) - 235464..235643 (+) 180 WP_034663316.1 YjzC family protein -
  AAVC46_RS01215 (AAVC46_01215) - 235812..237077 (+) 1266 WP_034663308.1 MFS transporter -
  AAVC46_RS01220 (AAVC46_01220) - 237195..237389 (-) 195 WP_003211779.1 YjzD family protein -
  AAVC46_RS01225 (AAVC46_01225) - 237601..238341 (+) 741 WP_060595993.1 hypothetical protein -
  AAVC46_RS01230 (AAVC46_01230) - 238417..238992 (+) 576 WP_340972349.1 nad binding enzyme -
  AAVC46_RS01235 (AAVC46_01235) med 239083..240045 (+) 963 WP_034663299.1 BMP family ABC transporter substrate-binding protein Regulator
  AAVC46_RS01240 (AAVC46_01240) comZ 240056..240253 (+) 198 WP_003211983.1 ComZ family protein Regulator
  AAVC46_RS01245 (AAVC46_01245) - 240263..240496 (-) 234 WP_034663296.1 hypothetical protein -
  AAVC46_RS01250 (AAVC46_01250) - 240666..241604 (+) 939 WP_012009552.1 beta-ketoacyl-ACP synthase III -
  AAVC46_RS01255 (AAVC46_01255) fabF 241626..242867 (+) 1242 WP_334748622.1 beta-ketoacyl-ACP synthase II -
  AAVC46_RS01260 (AAVC46_01260) - 242945..243739 (+) 795 WP_307499448.1 DUF2268 domain-containing protein -
  AAVC46_RS01265 (AAVC46_01265) - 243908..244888 (+) 981 WP_307499449.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=995288 AAVC46_RS01240 WP_003211983.1 240056..240253(+) (comZ) [Bacillus pumilus strain FUA2119]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=995288 AAVC46_RS01240 WP_003211983.1 240056..240253(+) (comZ) [Bacillus pumilus strain FUA2119]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
GGGTATTCAGCTTGAGCCCGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GGAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment