Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | AAVC46_RS01235 | Genome accession | NZ_CP154913 |
| Coordinates | 239083..240045 (+) | Length | 320 a.a. |
| NCBI ID | WP_034663299.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2119 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 234083..245045
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC46_RS01205 (AAVC46_01205) | argF | 234411..235361 (+) | 951 | WP_034663317.1 | ornithine carbamoyltransferase | - |
| AAVC46_RS01210 (AAVC46_01210) | - | 235464..235643 (+) | 180 | WP_034663316.1 | YjzC family protein | - |
| AAVC46_RS01215 (AAVC46_01215) | - | 235812..237077 (+) | 1266 | WP_034663308.1 | MFS transporter | - |
| AAVC46_RS01220 (AAVC46_01220) | - | 237195..237389 (-) | 195 | WP_003211779.1 | YjzD family protein | - |
| AAVC46_RS01225 (AAVC46_01225) | - | 237601..238341 (+) | 741 | WP_060595993.1 | hypothetical protein | - |
| AAVC46_RS01230 (AAVC46_01230) | - | 238417..238992 (+) | 576 | WP_340972349.1 | nad binding enzyme | - |
| AAVC46_RS01235 (AAVC46_01235) | med | 239083..240045 (+) | 963 | WP_034663299.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| AAVC46_RS01240 (AAVC46_01240) | comZ | 240056..240253 (+) | 198 | WP_003211983.1 | ComZ family protein | Regulator |
| AAVC46_RS01245 (AAVC46_01245) | - | 240263..240496 (-) | 234 | WP_034663296.1 | hypothetical protein | - |
| AAVC46_RS01250 (AAVC46_01250) | - | 240666..241604 (+) | 939 | WP_012009552.1 | beta-ketoacyl-ACP synthase III | - |
| AAVC46_RS01255 (AAVC46_01255) | fabF | 241626..242867 (+) | 1242 | WP_334748622.1 | beta-ketoacyl-ACP synthase II | - |
| AAVC46_RS01260 (AAVC46_01260) | - | 242945..243739 (+) | 795 | WP_307499448.1 | DUF2268 domain-containing protein | - |
| AAVC46_RS01265 (AAVC46_01265) | - | 243908..244888 (+) | 981 | WP_307499449.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35693.57 Da Isoelectric Point: 5.2616
>NTDB_id=995287 AAVC46_RS01235 WP_034663299.1 239083..240045(+) (med) [Bacillus pumilus strain FUA2119]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=995287 AAVC46_RS01235 WP_034663299.1 239083..240045(+) (med) [Bacillus pumilus strain FUA2119]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
64.537 |
97.813 |
0.631 |