Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AAYR27_RS18285 Genome accession   NZ_CP154912
Coordinates   3552509..3553459 (-) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus safensis strain FUA2118     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3547509..3558459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS18255 (AAYR27_18255) - 3547553..3548170 (-) 618 WP_098676791.1 TVP38/TMEM64 family protein -
  AAYR27_RS18260 (AAYR27_18260) - 3548327..3548689 (+) 363 WP_034282166.1 hypothetical protein -
  AAYR27_RS18265 (AAYR27_18265) - 3548758..3549711 (-) 954 WP_034282168.1 LCP family protein -
  AAYR27_RS18270 (AAYR27_18270) - 3549851..3550795 (-) 945 WP_098676790.1 siderophore ABC transporter substrate-binding protein -
  AAYR27_RS18275 (AAYR27_18275) - 3550817..3551575 (-) 759 WP_034282171.1 ATP-binding cassette domain-containing protein -
  AAYR27_RS18280 (AAYR27_18280) - 3551566..3552516 (-) 951 WP_268456275.1 iron chelate uptake ABC transporter family permease subunit -
  AAYR27_RS18285 (AAYR27_18285) ceuB 3552509..3553459 (-) 951 WP_041117046.1 ABC transporter permease Machinery gene
  AAYR27_RS18290 (AAYR27_18290) - 3553620..3553895 (-) 276 WP_034282178.1 barstar family protein -
  AAYR27_RS18295 (AAYR27_18295) - 3553961..3555130 (-) 1170 WP_034282180.1 MFS transporter -
  AAYR27_RS18300 (AAYR27_18300) - 3555276..3556715 (+) 1440 WP_034282181.1 PLP-dependent aminotransferase family protein -
  AAYR27_RS18305 (AAYR27_18305) - 3556747..3557229 (-) 483 WP_034282182.1 hypothetical protein -
  AAYR27_RS18310 (AAYR27_18310) comK 3557528..3558106 (-) 579 WP_034282183.1 competence protein ComK Regulator

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=995275 AAYR27_RS18285 WP_041117046.1 3552509..3553459(-) (ceuB) [Bacillus safensis strain FUA2118]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=995275 AAYR27_RS18285 WP_041117046.1 3552509..3553459(-) (ceuB) [Bacillus safensis strain FUA2118]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGCGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment