Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AAYR27_RS18310 | Genome accession | NZ_CP154912 |
| Coordinates | 3557528..3558106 (-) | Length | 192 a.a. |
| NCBI ID | WP_034282183.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain FUA2118 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3552528..3563106
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAYR27_RS18290 (AAYR27_18290) | - | 3553620..3553895 (-) | 276 | WP_034282178.1 | barstar family protein | - |
| AAYR27_RS18295 (AAYR27_18295) | - | 3553961..3555130 (-) | 1170 | WP_034282180.1 | MFS transporter | - |
| AAYR27_RS18300 (AAYR27_18300) | - | 3555276..3556715 (+) | 1440 | WP_034282181.1 | PLP-dependent aminotransferase family protein | - |
| AAYR27_RS18305 (AAYR27_18305) | - | 3556747..3557229 (-) | 483 | WP_034282182.1 | hypothetical protein | - |
| AAYR27_RS18310 (AAYR27_18310) | comK | 3557528..3558106 (-) | 579 | WP_034282183.1 | competence protein ComK | Regulator |
| AAYR27_RS18315 (AAYR27_18315) | - | 3558396..3558632 (+) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| AAYR27_RS18320 (AAYR27_18320) | - | 3558689..3559549 (-) | 861 | WP_034282185.1 | SDR family oxidoreductase | - |
| AAYR27_RS18325 (AAYR27_18325) | - | 3559691..3561223 (+) | 1533 | WP_098676788.1 | FAD-dependent oxidoreductase | - |
| AAYR27_RS18330 (AAYR27_18330) | - | 3561317..3562612 (+) | 1296 | WP_024426546.1 | globin-coupled sensor protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22322.36 Da Isoelectric Point: 8.7962
>NTDB_id=995276 AAYR27_RS18310 WP_034282183.1 3557528..3558106(-) (comK) [Bacillus safensis strain FUA2118]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=995276 AAYR27_RS18310 WP_034282183.1 3557528..3558106(-) (comK) [Bacillus safensis strain FUA2118]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |