Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   AAYR27_RS17920 Genome accession   NZ_CP154912
Coordinates   3473908..3474870 (-) Length   320 a.a.
NCBI ID   WP_024425055.1    Uniprot ID   -
Organism   Bacillus safensis strain FUA2118     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3468908..3479870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS17890 (AAYR27_17890) - 3469071..3470051 (-) 981 WP_025093401.1 ABC transporter ATP-binding protein -
  AAYR27_RS17895 (AAYR27_17895) - 3470201..3471004 (-) 804 WP_326133279.1 DUF2268 domain-containing protein -
  AAYR27_RS17900 (AAYR27_17900) fabF 3471082..3472323 (-) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  AAYR27_RS17905 (AAYR27_17905) - 3472345..3473283 (-) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  AAYR27_RS17910 (AAYR27_17910) - 3473455..3473688 (+) 234 WP_034282082.1 hypothetical protein -
  AAYR27_RS17915 (AAYR27_17915) comZ 3473698..3473895 (-) 198 WP_034282083.1 ComZ family protein Regulator
  AAYR27_RS17920 (AAYR27_17920) med 3473908..3474870 (-) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  AAYR27_RS17925 (AAYR27_17925) - 3474962..3475537 (-) 576 WP_061109668.1 hypothetical protein -
  AAYR27_RS17930 (AAYR27_17930) - 3475611..3476351 (-) 741 WP_101677381.1 hypothetical protein -
  AAYR27_RS17935 (AAYR27_17935) - 3476564..3476758 (+) 195 WP_003211779.1 YjzD family protein -
  AAYR27_RS17940 (AAYR27_17940) - 3476871..3478136 (-) 1266 WP_041117120.1 MFS transporter -
  AAYR27_RS17945 (AAYR27_17945) - 3478300..3478479 (-) 180 WP_008348517.1 YjzC family protein -
  AAYR27_RS17950 (AAYR27_17950) argF 3478582..3479532 (-) 951 WP_041117118.1 ornithine carbamoyltransferase -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35639.48 Da        Isoelectric Point: 5.0003

>NTDB_id=995272 AAYR27_RS17920 WP_024425055.1 3473908..3474870(-) (med) [Bacillus safensis strain FUA2118]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=995272 AAYR27_RS17920 WP_024425055.1 3473908..3474870(-) (med) [Bacillus safensis strain FUA2118]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAATTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAACAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAGGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGCTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACCGGAAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631


Multiple sequence alignment