Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAYR27_RS17915 Genome accession   NZ_CP154912
Coordinates   3473698..3473895 (-) Length   65 a.a.
NCBI ID   WP_034282083.1    Uniprot ID   -
Organism   Bacillus safensis strain FUA2118     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3468698..3478895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS17890 (AAYR27_17890) - 3469071..3470051 (-) 981 WP_025093401.1 ABC transporter ATP-binding protein -
  AAYR27_RS17895 (AAYR27_17895) - 3470201..3471004 (-) 804 WP_326133279.1 DUF2268 domain-containing protein -
  AAYR27_RS17900 (AAYR27_17900) fabF 3471082..3472323 (-) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  AAYR27_RS17905 (AAYR27_17905) - 3472345..3473283 (-) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  AAYR27_RS17910 (AAYR27_17910) - 3473455..3473688 (+) 234 WP_034282082.1 hypothetical protein -
  AAYR27_RS17915 (AAYR27_17915) comZ 3473698..3473895 (-) 198 WP_034282083.1 ComZ family protein Regulator
  AAYR27_RS17920 (AAYR27_17920) med 3473908..3474870 (-) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  AAYR27_RS17925 (AAYR27_17925) - 3474962..3475537 (-) 576 WP_061109668.1 hypothetical protein -
  AAYR27_RS17930 (AAYR27_17930) - 3475611..3476351 (-) 741 WP_101677381.1 hypothetical protein -
  AAYR27_RS17935 (AAYR27_17935) - 3476564..3476758 (+) 195 WP_003211779.1 YjzD family protein -
  AAYR27_RS17940 (AAYR27_17940) - 3476871..3478136 (-) 1266 WP_041117120.1 MFS transporter -
  AAYR27_RS17945 (AAYR27_17945) - 3478300..3478479 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1509

>NTDB_id=995271 AAYR27_RS17915 WP_034282083.1 3473698..3473895(-) (comZ) [Bacillus safensis strain FUA2118]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=995271 AAYR27_RS17915 WP_034282083.1 3473698..3473895(-) (comZ) [Bacillus safensis strain FUA2118]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGACCCTGAAGCACTTCAGCCGCTTCTAACACTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment