Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AAYR28_RS05020 | Genome accession | NZ_CP154909 |
| Coordinates | 997944..998522 (+) | Length | 192 a.a. |
| NCBI ID | WP_034282183.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain FUA2117 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 992944..1003522
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAYR28_RS05000 (AAYR28_05000) | - | 993439..994734 (-) | 1296 | WP_024426546.1 | globin-coupled sensor protein | - |
| AAYR28_RS05005 (AAYR28_05005) | - | 994827..996359 (-) | 1533 | WP_345808943.1 | FAD-dependent oxidoreductase | - |
| AAYR28_RS05010 (AAYR28_05010) | - | 996501..997361 (+) | 861 | WP_034282185.1 | SDR family oxidoreductase | - |
| AAYR28_RS05015 (AAYR28_05015) | - | 997418..997654 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| AAYR28_RS05020 (AAYR28_05020) | comK | 997944..998522 (+) | 579 | WP_034282183.1 | competence protein ComK | Regulator |
| AAYR28_RS05025 (AAYR28_05025) | - | 998821..999303 (+) | 483 | WP_034282182.1 | hypothetical protein | - |
| AAYR28_RS05030 (AAYR28_05030) | - | 999586..999864 (+) | 279 | WP_024426542.1 | barstar family protein | - |
| AAYR28_RS05035 (AAYR28_05035) | ceuB | 1000026..1000976 (+) | 951 | WP_120207356.1 | ABC transporter permease | Machinery gene |
| AAYR28_RS05040 (AAYR28_05040) | - | 1000969..1001919 (+) | 951 | WP_024425487.1 | iron chelate uptake ABC transporter family permease subunit | - |
| AAYR28_RS05045 (AAYR28_05045) | - | 1001910..1002668 (+) | 759 | WP_056766095.1 | ATP-binding cassette domain-containing protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22322.36 Da Isoelectric Point: 8.7962
>NTDB_id=995168 AAYR28_RS05020 WP_034282183.1 997944..998522(+) (comK) [Bacillus safensis strain FUA2117]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=995168 AAYR28_RS05020 WP_034282183.1 997944..998522(+) (comK) [Bacillus safensis strain FUA2117]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |