Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AAVC22_RS08550 Genome accession   NZ_CP154902
Coordinates   1735965..1736363 (+) Length   132 a.a.
NCBI ID   WP_023855672.1    Uniprot ID   A0AAW6KF42
Organism   Bacillus paralicheniformis strain FUA2150     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1730965..1741363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC22_RS08530 (AAVC22_08530) - 1733155..1733895 (+) 741 WP_020450098.1 LXG domain-containing protein -
  AAVC22_RS08535 (AAVC22_08535) - 1734219..1735022 (-) 804 WP_025810788.1 protein kinase -
  AAVC22_RS08540 (AAVC22_08540) - 1735028..1735198 (-) 171 WP_023855671.1 hypothetical protein -
  AAVC22_RS08545 (AAVC22_08545) nucA/comI 1735501..1735947 (+) 447 WP_020450096.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AAVC22_RS08550 (AAVC22_08550) nin/comJ 1735965..1736363 (+) 399 WP_023855672.1 competence protein ComJ Regulator
  AAVC22_RS08555 (AAVC22_08555) - 1736403..1737839 (-) 1437 WP_020450094.1 family 1 glycosylhydrolase -
  AAVC22_RS08560 (AAVC22_08560) - 1737909..1738634 (-) 726 WP_020450093.1 AAA family ATPase -
  AAVC22_RS08565 (AAVC22_08565) - 1738730..1739281 (-) 552 WP_035337275.1 NAD(P)H-dependent oxidoreductase -
  AAVC22_RS08570 (AAVC22_08570) - 1739465..1740340 (+) 876 WP_020450091.1 transporter substrate-binding domain-containing protein -
  AAVC22_RS08575 (AAVC22_08575) - 1740352..1741035 (+) 684 WP_043054048.1 amino acid ABC transporter permease -
  AAVC22_RS08580 (AAVC22_08580) - 1741194..1741355 (-) 162 WP_023855674.1 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14928.99 Da        Isoelectric Point: 5.1700

>NTDB_id=994995 AAVC22_RS08550 WP_023855672.1 1735965..1736363(+) (nin/comJ) [Bacillus paralicheniformis strain FUA2150]
MIKKWEAEEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTAGEHAVSFEALDNTASLVEVRLNVQEQVPSFNRRVTVSF
DVLHGGVEIASVLSKKLSCDIPQGVYQLTCYTIMPDQSSTAKITYILDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=994995 AAVC22_RS08550 WP_023855672.1 1735965..1736363(+) (nin/comJ) [Bacillus paralicheniformis strain FUA2150]
TTGATCAAAAAGTGGGAAGCAGAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAAAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGCTACACAGCGGGAGAACACGCGGTCTCGTTTGAAGCTCTCGATA
ATACGGCATCATTAGTAGAAGTTCGTTTGAATGTCCAGGAACAGGTTCCCTCCTTTAACAGGCGCGTCACCGTTTCTTTC
GACGTGCTTCATGGCGGGGTCGAAATTGCAAGCGTCCTATCCAAGAAATTGTCATGCGACATCCCGCAAGGCGTCTATCA
GCTGACATGCTATACGATTATGCCTGATCAAAGCAGCACTGCGAAGATCACCTATATTCTCGATTTTAAACAGGCCTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

51.562

96.97

0.5

Multiple sequence alignment