Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAVC70_RS16960 Genome accession   NZ_CP154898
Coordinates   3078803..3078994 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus amyloliquefaciens strain Fad 97     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3073803..3083994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC70_RS16930 (AAVC70_16930) argF 3074646..3075601 (+) 956 Protein_3156 ornithine carbamoyltransferase -
  AAVC70_RS16935 (AAVC70_16935) - 3075693..3075872 (+) 180 WP_013351809.1 YjzC family protein -
  AAVC70_RS16940 (AAVC70_16940) - 3075913..3076101 (-) 189 WP_013351810.1 YjzD family protein -
  AAVC70_RS16945 (AAVC70_16945) - 3076362..3077096 (+) 735 WP_013351811.1 hypothetical protein -
  AAVC70_RS16950 (AAVC70_16950) - 3077177..3077743 (+) 567 WP_013351812.1 hypothetical protein -
  AAVC70_RS16955 (AAVC70_16955) med 3077837..3078790 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  AAVC70_RS16960 (AAVC70_16960) comZ 3078803..3078994 (+) 192 WP_013351814.1 ComZ family protein Regulator
  AAVC70_RS16965 (AAVC70_16965) - 3079024..3079242 (-) 219 WP_013351815.1 hypothetical protein -
  AAVC70_RS16970 (AAVC70_16970) - 3079408..3080346 (+) 939 WP_013351816.1 beta-ketoacyl-ACP synthase III -
  AAVC70_RS16975 (AAVC70_16975) fabF 3080370..3081608 (+) 1239 WP_013351817.1 beta-ketoacyl-ACP synthase II -
  AAVC70_RS16980 (AAVC70_16980) - 3081692..3082477 (+) 786 WP_013351818.1 DUF2268 domain-containing protein -
  AAVC70_RS16985 (AAVC70_16985) - 3082650..3083636 (+) 987 WP_013351819.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=994878 AAVC70_RS16960 WP_013351814.1 3078803..3078994(+) (comZ) [Bacillus amyloliquefaciens strain Fad 97]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=994878 AAVC70_RS16960 WP_013351814.1 3078803..3078994(+) (comZ) [Bacillus amyloliquefaciens strain Fad 97]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81

Multiple sequence alignment