Detailed information NTG0994877

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAVC70_RS16955
• Genome accession: NZ_CP154898
• Coordinates: 3077837..3078790 (+)
• Length: 317 a.a.
• NCBI ID: WP_013351813.1
• Uniprot ID: A0AAP7TCS7
• Organism: Bacillus amyloliquefaciens strain Fad 97
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3072837..3083790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC70_RS16930 (AAVC70_16930)	argF	3074646..3075601 (+)	956	Protein_3156	ornithine carbamoyltransferase	-
AAVC70_RS16935 (AAVC70_16935)	-	3075693..3075872 (+)	180	WP_013351809.1	YjzC family protein	-
AAVC70_RS16940 (AAVC70_16940)	-	3075913..3076101 (-)	189	WP_013351810.1	YjzD family protein	-
AAVC70_RS16945 (AAVC70_16945)	-	3076362..3077096 (+)	735	WP_013351811.1	hypothetical protein	-
AAVC70_RS16950 (AAVC70_16950)	-	3077177..3077743 (+)	567	WP_013351812.1	hypothetical protein	-
AAVC70_RS16955 (AAVC70_16955)	med	3077837..3078790 (+)	954	WP_013351813.1	BMP family ABC transporter substrate-binding protein	Regulator
AAVC70_RS16960 (AAVC70_16960)	comZ	3078803..3078994 (+)	192	WP_013351814.1	ComZ family protein	Regulator
AAVC70_RS16965 (AAVC70_16965)	-	3079024..3079242 (-)	219	WP_013351815.1	hypothetical protein	-
AAVC70_RS16970 (AAVC70_16970)	-	3079408..3080346 (+)	939	WP_013351816.1	beta-ketoacyl-ACP synthase III	-
AAVC70_RS16975 (AAVC70_16975)	fabF	3080370..3081608 (+)	1239	WP_013351817.1	beta-ketoacyl-ACP synthase II	-
AAVC70_RS16980 (AAVC70_16980)	-	3081692..3082477 (+)	786	WP_013351818.1	DUF2268 domain-containing protein	-
AAVC70_RS16985 (AAVC70_16985)	-	3082650..3083636 (+)	987	WP_013351819.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.94 Da
• Isoelectric Point: 4.5494

>NTDB_id=994877 AAVC70_RS16955 WP_013351813.1 3077837..3078790(+) (med) [Bacillus amyloliquefaciens strain Fad 97]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=994877 AAVC70_RS16955 WP_013351813.1 3077837..3078790(+) (med) [Bacillus amyloliquefaciens strain Fad 97]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785