Detailed information NTG0994674

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAVD18_RS01580
• Genome accession: NZ_CP154893
• Coordinates: 282735..283688 (+)
• Length: 317 a.a.
• NCBI ID: WP_013351813.1
• Uniprot ID: A0AAP7TCS7
• Organism: Bacillus amyloliquefaciens strain Fad 11/2
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 277735..288688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVD18_RS01555 (AAVD18_01555)	argF	279546..280499 (+)	954	WP_345808524.1	ornithine carbamoyltransferase	-
AAVD18_RS01560 (AAVD18_01560)	-	280591..280770 (+)	180	WP_013351809.1	YjzC family protein	-
AAVD18_RS01565 (AAVD18_01565)	-	280811..280999 (-)	189	WP_013351810.1	YjzD family protein	-
AAVD18_RS01570 (AAVD18_01570)	-	281260..281994 (+)	735	WP_013351811.1	hypothetical protein	-
AAVD18_RS01575 (AAVD18_01575)	-	282075..282641 (+)	567	WP_013351812.1	hypothetical protein	-
AAVD18_RS01580 (AAVD18_01580)	med	282735..283688 (+)	954	WP_013351813.1	BMP family ABC transporter substrate-binding protein	Regulator
AAVD18_RS01585 (AAVD18_01585)	comZ	283701..283892 (+)	192	WP_013351814.1	ComZ family protein	Regulator
AAVD18_RS01590 (AAVD18_01590)	-	283922..284140 (-)	219	WP_013351815.1	hypothetical protein	-
AAVD18_RS01595 (AAVD18_01595)	-	284306..285244 (+)	939	WP_013351816.1	beta-ketoacyl-ACP synthase III	-
AAVD18_RS01600 (AAVD18_01600)	fabF	285268..286506 (+)	1239	WP_013351817.1	beta-ketoacyl-ACP synthase II	-
AAVD18_RS01605 (AAVD18_01605)	-	286590..287375 (+)	786	WP_013351818.1	DUF2268 domain-containing protein	-
AAVD18_RS01610 (AAVD18_01610)	-	287548..288534 (+)	987	WP_013351819.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.94 Da
• Isoelectric Point: 4.5494

>NTDB_id=994674 AAVD18_RS01580 WP_013351813.1 282735..283688(+) (med) [Bacillus amyloliquefaciens strain Fad 11/2]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=994674 AAVD18_RS01580 WP_013351813.1 282735..283688(+) (med) [Bacillus amyloliquefaciens strain Fad 11/2]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785