Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAFU62_RS06625 Genome accession   NZ_CP154891
Coordinates   1360101..1360910 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 318231     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1355101..1365910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFU62_RS06615 (AAFU62_06615) smc 1355427..1358965 (-) 3539 Protein_1245 chromosome segregation protein SMC -
  AAFU62_RS06620 (AAFU62_06620) rnc 1358966..1359658 (-) 693 WP_002990670.1 ribonuclease III -
  AAFU62_RS06625 (AAFU62_06625) vicX 1360101..1360910 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  AAFU62_RS06630 (AAFU62_06630) vicK 1360914..1362266 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AAFU62_RS06635 (AAFU62_06635) vicR 1362259..1362969 (-) 711 WP_136268258.1 response regulator YycF Regulator
  AAFU62_RS06640 (AAFU62_06640) - 1363131..1364165 (-) 1035 WP_194118140.1 DUF3114 domain-containing protein -
  AAFU62_RS06645 (AAFU62_06645) - 1364221..1365468 (-) 1248 WP_136094309.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=994655 AAFU62_RS06625 WP_002985641.1 1360101..1360910(-) (vicX) [Streptococcus pyogenes strain 318231]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=994655 AAFU62_RS06625 WP_002985641.1 1360101..1360910(-) (vicX) [Streptococcus pyogenes strain 318231]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment