Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   EW024_RS07230 Genome accession   NZ_LR130237
Coordinates   1406653..1407687 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain SP444 isolate SP444     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1401653..1412687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW024_RS07195 - 1402429..1402731 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  EW024_RS07200 rnpM 1402724..1403020 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  EW024_RS07205 nusA 1403036..1404193 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  EW024_RS07210 rimP 1404368..1404904 (-) 537 WP_011528897.1 ribosome maturation factor RimP -
  EW024_RS07220 trmB 1405163..1405798 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EW024_RS07225 ccrZ 1405798..1406589 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EW024_RS07230 pptB 1406653..1407687 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  EW024_RS07235 pptA 1407690..1408415 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EW024_RS07240 - 1408487..1408906 (+) 420 WP_002983376.1 HIT family protein -
  EW024_RS07245 - 1408903..1409259 (+) 357 WP_002983373.1 hypothetical protein -
  EW024_RS07250 brpA 1409370..1410653 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  EW024_RS07255 - 1410662..1411186 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  EW024_RS07260 tsaE 1411161..1411622 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=994250 EW024_RS07230 WP_010922583.1 1406653..1407687(-) (pptB) [Streptococcus pyogenes strain SP444 isolate SP444]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=994250 EW024_RS07230 WP_010922583.1 1406653..1407687(-) (pptB) [Streptococcus pyogenes strain SP444 isolate SP444]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment