Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAG895_RS16945 Genome accession   NZ_CP154859
Coordinates   3726070..3726474 (+) Length   134 a.a.
NCBI ID   WP_345793147.1    Uniprot ID   -
Organism   Thauera sp. JM12B12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3721070..3731474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG895_RS16925 (AAG895_16925) hemL 3722875..3724158 (-) 1284 WP_345793145.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AAG895_RS16930 (AAG895_16930) thiE 3724241..3724882 (-) 642 WP_345793146.1 thiamine phosphate synthase -
  AAG895_RS16935 (AAG895_16935) - 3724875..3725708 (-) 834 WP_345795322.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AAG895_RS16940 (AAG895_16940) - 3725859..3726011 (+) 153 WP_345795323.1 rubredoxin -
  AAG895_RS16945 (AAG895_16945) pilG 3726070..3726474 (+) 405 WP_345793147.1 response regulator Regulator
  AAG895_RS16950 (AAG895_16950) - 3726494..3726859 (+) 366 WP_345793148.1 response regulator -
  AAG895_RS16955 (AAG895_16955) - 3726866..3727372 (+) 507 WP_345793149.1 chemotaxis protein CheW -
  AAG895_RS16960 (AAG895_16960) - 3727431..3729536 (+) 2106 WP_345793150.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14667.96 Da        Isoelectric Point: 6.8616

>NTDB_id=994160 AAG895_RS16945 WP_345793147.1 3726070..3726474(+) (pilG) [Thauera sp. JM12B12]
MDIAGLKVMVIDDSNTIRRSAEIFLSQAGCQVLLAEDGFDALAKITDHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSST
PVIMLSSRDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATHAAARPAPPATEH

Nucleotide


Download         Length: 405 bp        

>NTDB_id=994160 AAG895_RS16945 WP_345793147.1 3726070..3726474(+) (pilG) [Thauera sp. JM12B12]
ATGGACATTGCCGGGCTGAAGGTGATGGTCATCGACGACAGCAACACGATCCGCCGCAGCGCGGAGATCTTCCTGTCCCA
GGCGGGCTGCCAGGTGCTGCTCGCTGAGGACGGCTTCGACGCGCTCGCGAAGATCACCGACCACCACCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCACTCATCAAGAAGAATCCGCGTCTGTCGTCCACG
CCGGTGATCATGCTGTCGTCGCGCGACGGGCTGTTCGACCGCGCGCGCGGGCGCATGGTCGGCTCCGACGAATACCTCAC
CAAACCCTTCACCAAGGACAGCCTGCTCAAGGCGGTGGCCACCCACGCCGCCGCGCGTCCGGCCCCGCCGGCGACCGAGC
ACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.116

90.299

0.597

Multiple sequence alignment