Detailed information NTG0994149

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AAG895_RS04950
• Genome accession: NZ_CP154859
• Coordinates: 1112060..1113481 (+)
• Length: 473 a.a.
• NCBI ID: WP_345794427.1
• Uniprot ID: -
• Organism: Thauera sp. JM12B12
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1107060..1118481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAG895_RS04930 (AAG895_04930)	mtnA	1107665..1108735 (-)	1071	WP_345794423.1	S-methyl-5-thioribose-1-phosphate isomerase	-
AAG895_RS04935 (AAG895_04935)	-	1108911..1110068 (-)	1158	WP_345794424.1	pyridoxal phosphate-dependent aminotransferase	-
AAG895_RS04940 (AAG895_04940)	-	1110251..1110490 (+)	240	WP_345794425.1	PP0621 family protein	-
AAG895_RS04945 (AAG895_04945)	-	1110459..1112063 (+)	1605	WP_345794426.1	ATP-binding protein	-
AAG895_RS04950 (AAG895_04950)	pilR	1112060..1113481 (+)	1422	WP_345794427.1	sigma-54 dependent transcriptional regulator	Regulator
AAG895_RS04955 (AAG895_04955)	-	1113739..1115148 (+)	1410	WP_345794428.1	MBL fold metallo-hydrolase	-
AAG895_RS04960 (AAG895_04960)	-	1115452..1116033 (+)	582	WP_345794429.1	XrtA/PEP-CTERM system exopolysaccharide export protein	-
AAG895_RS04965 (AAG895_04965)	-	1116111..1117655 (+)	1545	WP_345794430.1	XrtA system polysaccharide chain length determinant	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 51526.66 Da
• Isoelectric Point: 6.0021

>NTDB_id=994149 AAG895_RS04950 WP_345794427.1 1112060..1113481(+) (pilR) [Thauera sp. JM12B12]
MTHTERRNRPQSIDVLVVDDEDDIRELLELSLMRMGLACDSAGSLQAARDLLAQRRYRLCLTDMRLPDGDGLELVEHIQS
CQPGLPVAVITAFGSIETAIRALKLGAFDFVTKPVELKALRELVQHALKLRDQAGSEAANAAAGARALIGHSPAFEQLRA
QAEKLARNQAPVFIHGESGTGKEVIARTIHSLGARASGPFVPVNCGAISPELMESEFFGHRKGSFTGAATDKEGLFQAAN
GGTLFLDEIGELPLAMQVKLLRAIQERAVRPVGAHAEEAVDVRILSASHQDLGRLVAEGRFRQDLFFRINVITLRVPPLR
ERREDIAELAAHILGRLAAREGGLPRRLSPDALQALQRYAFPGNVRELENLLERACALCEGEAIGAADIELYPEQTASGW
LTDIAPGMSVGDDAAAHESGSESVAGGDSGDDAERLRIIRALEQTRWNRSAAARNLGMTLRQLRYRLQKWGME

Nucleotide

• Length: 1422 bp

>NTDB_id=994149 AAG895_RS04950 WP_345794427.1 1112060..1113481(+) (pilR) [Thauera sp. JM12B12]
ATGACACATACCGAACGCCGCAACCGCCCCCAGTCGATCGATGTCCTCGTCGTCGATGACGAGGACGACATCCGCGAACT
GCTCGAGCTCTCGCTGATGCGCATGGGCCTGGCCTGCGACAGCGCCGGATCGCTGCAGGCGGCGCGGGACTTGCTCGCGC
AGCGGCGCTACCGGCTGTGCCTCACCGACATGCGCCTGCCCGACGGCGACGGCCTCGAGCTGGTCGAGCACATCCAGAGC
TGCCAGCCCGGCTTGCCGGTGGCGGTGATCACCGCCTTCGGCAGCATCGAGACGGCGATCCGCGCGCTCAAGCTCGGCGC
CTTCGATTTCGTCACCAAGCCGGTCGAGCTCAAGGCGCTGCGCGAGCTCGTGCAGCATGCGCTCAAGCTCAGGGACCAGG
CCGGCAGCGAAGCGGCGAATGCGGCGGCGGGCGCGCGCGCGCTCATCGGGCACTCGCCGGCCTTCGAGCAGCTGCGCGCG
CAGGCCGAGAAGCTCGCGCGCAACCAGGCGCCGGTGTTCATCCATGGCGAGTCGGGCACCGGCAAGGAAGTCATCGCGCG
CACCATCCACAGCCTGGGGGCGCGTGCCTCCGGACCCTTCGTGCCGGTCAACTGCGGGGCGATCTCGCCCGAGCTCATGG
AGAGCGAGTTCTTCGGCCACCGCAAGGGCAGCTTCACGGGCGCGGCGACCGACAAGGAGGGGCTGTTCCAGGCCGCCAAC
GGCGGCACGCTCTTTCTCGACGAGATCGGCGAGCTGCCTCTCGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAGCG
CGCGGTGCGTCCGGTCGGCGCACACGCGGAAGAGGCGGTCGATGTCCGCATCCTGTCGGCCTCGCACCAGGATCTCGGGC
GGCTGGTCGCGGAGGGGCGCTTCCGCCAGGATCTGTTCTTCCGCATCAACGTCATCACCTTGCGCGTGCCCCCCCTGCGC
GAGCGCCGCGAGGACATCGCCGAGCTTGCTGCCCACATCCTCGGGCGGCTCGCCGCGCGCGAGGGTGGGCTGCCGCGCAG
GCTCTCCCCCGACGCCCTGCAGGCGCTGCAGCGATATGCCTTCCCGGGCAACGTGCGCGAGCTCGAGAACCTGCTCGAGC
GCGCCTGCGCGCTGTGCGAGGGTGAGGCGATCGGCGCCGCCGACATCGAGCTCTACCCCGAGCAGACCGCCTCGGGCTGG
CTCACCGACATCGCGCCGGGCATGTCCGTTGGCGACGACGCCGCCGCGCACGAAAGCGGGAGCGAGTCCGTGGCGGGCGG
CGATTCGGGCGACGACGCCGAGCGCCTGCGCATCATCCGCGCCCTCGAGCAGACGCGCTGGAACCGCTCCGCCGCCGCGC
GCAATCTCGGCATGACCCTGCGCCAGCTGCGCTACCGGCTGCAGAAATGGGGAATGGAGTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (15-124)

• Sigma-54 interaction domain (Sigma54_activat) (148-314)

• Bacterial regulatory protein, Fis family (HTH_8) (432-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.607	96.829	0.577
pilR	Acinetobacter baumannii strain A118	48.485	97.674	0.474